Miyakogusa Predicted Gene
- Lj2g3v1968450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1968450.1 Non Chatacterized Hit- tr|I3S107|I3S107_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.69,0,ARF-like
small GTPases; ARF, ADP-ribosylatio,Small GTPase superfamily, ARF
type; Sar1p-like members ,CUFF.38144.1
(462 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59558 similar to UniRef100_Q10QD5 Cluster: Small GTP-... 916 0.0
gnl|LJGI|GO008396 homologue to UniRef100_A9RFQ6 Cluster: Arl8-fa... 490 e-138
gnl|LJGI|GO024449 similar to UniRef100_A9RFQ6 Cluster: Arl8-fami... 70 1e-11
>gnl|LJGI|TC59558 similar to UniRef100_Q10QD5 Cluster: Small GTP-binding protein
domain containing protein, expressed; n=2; Oryza
sativa|Rep: Small GTP-binding protein domain containing
protein, expressed - Oryza sativa subsp. japonica
(Rice), complete
Length = 1003
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1 atgggattatgggaagcttttctcaattggcttcgcagccttttcttcaagcaggaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 atgggattatgggaagcttttctcaattggcttcgcagccttttcttcaagcaggaaatg 181
Query: 61 gagttatcgctcataggacttcagaatgctggaaagacttcccttgtaaatgttgttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gagttatcgctcataggacttcagaatgctggaaagacttcccttgtaaatgttgttgct 241
Query: 121 actggtggatatagcgaggatatgattcccactgtgggattcaatatgaggaaagtaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 actggtggatatagcgaggatatgattcccactgtgggattcaatatgaggaaagtaaca 301
Query: 181 aaaggcaatgttacaattaagttatgggatcttggagggcaacctaggttccgcagcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aaaggcaatgttacaattaagttatgggatcttggagggcaacctaggttccgcagcatg 361
Query: 241 tgggaacgttactgtcgtgcggtttctgctattgtatatgttgttgatgctgctgatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgggaacgttactgtcgtgcggtttctgctattgtatatgttgttgatgctgctgatcca 421
Query: 301 gataaccttagcatatcaagaagtgaacttcatgatttgctgagcaaaccatcattgagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gataaccttagcatatcaagaagtgaacttcatgatttgctgagcaaaccatcattgagt 481
Query: 361 ggtatccctttgttggtgttggggaacaagattgacaaaccaggggctctctccaaacaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ggtatccctttgttggtgttggggaacaagattgacaaaccaggggctctctccaaacaa 541
Query: 421 gcattgaccgatcaaatggatctgaagtcaattactgacaga 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gcattgaccgatcaaatggatctgaagtcaattactgacaga 583
>gnl|LJGI|GO008396 homologue to UniRef100_A9RFQ6 Cluster: Arl8-family small GTPase;
n=1; Physcomitrella patens subsp. patens|Rep:
Arl8-family small GTPase - Physcomitrella patens subsp.
patens, partial (64%)
Length = 448
Score = 490 bits (247), Expect = e-138
Identities = 247/247 (100%)
Strand = Plus / Plus
Query: 1 atgggattatgggaagcttttctcaattggcttcgcagccttttcttcaagcaggaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atgggattatgggaagcttttctcaattggcttcgcagccttttcttcaagcaggaaatg 154
Query: 61 gagttatcgctcataggacttcagaatgctggaaagacttcccttgtaaatgttgttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gagttatcgctcataggacttcagaatgctggaaagacttcccttgtaaatgttgttgct 214
Query: 121 actggtggatatagcgaggatatgattcccactgtgggattcaatatgaggaaagtaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 actggtggatatagcgaggatatgattcccactgtgggattcaatatgaggaaagtaaca 274
Query: 181 aaaggcaatgttacaattaagttatgggatcttggagggcaacctaggttccgcagcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aaaggcaatgttacaattaagttatgggatcttggagggcaacctaggttccgcagcatg 334
Query: 241 tgggaac 247
|||||||
Sbjct: 335 tgggaac 341
Score = 212 bits (107), Expect = 1e-54
Identities = 110/111 (99%)
Strand = Plus / Plus
Query: 325 gaacttcatgatttgctgagcaaaccatcattgagtggtatccctttgttggtgttgggg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gaacttcatgatttgctgagcaaaccatcattgagtggtatccctttgttggtgttgggg 397
Query: 385 aacaagattgacaaaccaggggctctctccaaacaagcattgaccgatcaa 435
|||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 398 aacaagattgacaaaccacgggctctctccaaacaagcattgaccgatcaa 448
>gnl|LJGI|GO024449 similar to UniRef100_A9RFQ6 Cluster: Arl8-family small GTPase; n=1;
Physcomitrella patens subsp. patens|Rep: Arl8-family
small GTPase - Physcomitrella patens subsp. patens,
complete
Length = 656
Score = 69.9 bits (35), Expect = 1e-11
Identities = 170/215 (79%)
Strand = Plus / Plus
Query: 79 cttcagaatgctggaaagacttcccttgtaaatgttgttgctactggtggatatagcgag 138
|||||||||||||| ||||| || ||||| ||| |||||||||| || || || |||
Sbjct: 143 cttcagaatgctggcaagacatctcttgtcaattcaattgctactgggggttacagtgag 202
Query: 139 gatatgattcccactgtgggattcaatatgaggaaagtaacaaaaggcaatgttacaatt 198
|| |||||||| ||||| || ||||| ||| ||||||| || || || ||||| || ||
Sbjct: 203 gacatgattccaactgttgggttcaacatgcggaaagtgactaagggaaatgtcaccata 262
Query: 199 aagttatgggatcttggagggcaacctaggttccgcagcatgtgggaacgttactgtcgt 258
||| | ||||| ||||| || || |||||||| | |||||||| || ||||||||
Sbjct: 263 aagctttgggaccttggtggacagaggaggttccggacaatgtgggagcgctactgtcgc 322
Query: 259 gcggtttctgctattgtatatgttgttgatgctgc 293
| || ||||||||||| |||||||| ||||||||
Sbjct: 323 ggcgtctctgctattgtgtatgttgtagatgctgc 357