Miyakogusa Predicted Gene

Lj2g3v1968210.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1968210.1 tr|C1FEK9|C1FEK9_MICSR H+-or Na+-translocating
f-type, v-type and A-type ATPase superfamily
OS=Micro,42.99,1e-18,SUBFAMILY NOT NAMED,NULL; VACUOLAR ATP SYNTHASE
SUBUNIT AC39,ATPase, V0 complex, subunit D; vATP-syn,gene.g42467.t1.1
         (702 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67393 homologue to UniRef100_A2Q5T7 Cluster: H+-trans...   539   e-153

>gnl|LJGI|TC67393 homologue to UniRef100_A2Q5T7 Cluster: H+-transporting two-sector
            ATPase, C (AC39) subunit; n=1; Medicago truncatula|Rep:
            H+-transporting two-sector ATPase, C (AC39) subunit -
            Medicago truncatula (Barrel medic), complete
          Length = 1477

 Score =  539 bits (272), Expect = e-153
 Identities = 317/332 (95%)
 Strand = Plus / Plus

                                                                        
Query: 371  ctaactttggtttgctttacccctatggtcatgaggaacttgctgtctgtgaggacgttg 430
            ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 870  ctaactttggtttgctttacccctatggtcacgaggaacttgctgtctgtgaggatgttg 929

                                                                        
Query: 431  atcaggtttatgctgttatggaaaaataccctccctatcagtctatttttgccaagttat 490
            ||||||||  |||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 930  atcaggttcgtgctgtcatggaaaaataccctccctatcaatctatttttgccaagttat 989

                                                                        
Query: 491  catatggagagagtcagatgcctgacaaggcattctatgaggaggaggcgaagaggcttt 550
            ||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| |
Sbjct: 990  catatggagagagccagatgcttgacaaggcattctatgaggaggaggtgaagaggctct 1049

                                                                        
Query: 551  gcttggtgtttgagcaacagtttcagtatgctgtgttcttcgagtatatgaggttaggga 610
            |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| || 
Sbjct: 1050 gcttggcgtttgagcaacagtttcactatgctgtgttcttcgcgtatatgaggttaaggg 1109

                                                                        
Query: 611  aacaggagatcaggaacctaatgtggatttcagaatgtgtggctcagaatcagaagtcca 670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 aacaggagatcaggaacctaatgtggatttcagaatgtgtggctcagaatcagaagtcca 1169

                                            
Query: 671  gagttcatgacagtgttgtcttcatattttag 702
            ||||||||||||||||||||||||||||||||
Sbjct: 1170 gagttcatgacagtgttgtcttcatattttag 1201