Miyakogusa Predicted Gene

Lj2g3v1968180.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1968180.1 Non Chatacterized Hit- tr|I1LH70|I1LH70_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.47441 PE,74.26,0,Formin
homology 2 domain (FH2 domain),Actin-binding FH2; Formin
Homology,Actin-binding FH2/DRF autor,CUFF.38104.1
         (2715 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63379 similar to UniRef100_A7PLQ0 Cluster: Chromosome...   876   0.0  
gnl|LJGI|TC81872 similar to UniRef100_A7PLQ0 Cluster: Chromosome...   159   1e-37
gnl|LJGI|GO036858 similar to UniRef100_A7QAW0 Cluster: Chromosom...    62   2e-08
gnl|LJGI|TC76831 similar to UniRef100_A2Q5W8 Cluster: Actin-bind...    54   5e-06
gnl|LJGI|TC71816 similar to UniRef100_A2Q5W8 Cluster: Actin-bind...    54   5e-06

>gnl|LJGI|TC63379 similar to UniRef100_A7PLQ0 Cluster: Chromosome chr7 scaffold_20,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_20, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 826

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2274 ctcagatgtcttgagaggctatctttcaaagctcgaaacggggcttgaaaaagtgagact 2333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctcagatgtcttgagaggctatctttcaaagctcgaaacggggcttgaaaaagtgagact 60

                                                                        
Query: 2334 ggttttgcaatatgagaagccagataagcaaggcaatttctttaactccactaagctatt 2393
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ggttttgcaatatgagaagccagataagcaaggcaatttctttaactccactaagctatt 120

                                                                        
Query: 2394 tctgaaatatgctgaggatgaaatagtgaggcttaaggctgatgagagaaaggccttatt 2453
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tctgaaatatgctgaggatgaaatagtgaggcttaaggctgatgagagaaaggccttatt 180

                                                                        
Query: 2454 gcttgtgaaagaagttacagaatactttcatgggaatgtagcaaaggaagaagcccaccc 2513
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  gcttgtgaaagaagttacagaatactttcatgggaatgtagcaaaggaagaagcccaccc 240

                                                                        
Query: 2514 tttcagaatttttatgattgtaagagactttctaaatattctggatctagtgtgcaaaga 2573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tttcagaatttttatgattgtaagagactttctaaatattctggatctagtgtgcaaaga 300

                                                                        
Query: 2574 agttggaagaatgcatgatagaattgttggcggttcttccagatccttccgaatagcttc 2633
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  agttggaagaatgcatgatagaattgttggcggttcttccagatccttccgaatagcttc 360

                                                                        
Query: 2634 cagtgcctctttaccggttctgaacaggtataatgcaagacaagatgggagctcggatga 2693
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  cagtgcctctttaccggttctgaacaggtataatgcaagacaagatgggagctcggatga 420

                                  
Query: 2694 ggaaagctcatccccctagtat 2715
            ||||||||||||||||||||||
Sbjct: 421  ggaaagctcatccccctagtat 442


>gnl|LJGI|TC81872 similar to UniRef100_A7PLQ0 Cluster: Chromosome chr7 scaffold_20,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_20, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (9%)
          Length = 660

 Score =  159 bits (80), Expect = 1e-37
 Identities = 185/220 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2494 gcaaaggaagaagcccaccctttcagaatttttatgattgtaagagactttctaaatatt 2553
            ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 15   gcaaaagaagaagcgcaccctttcagaattttcatgattgtaagagactttctaaatatt 74

                                                                        
Query: 2554 ctggatctagtgtgcaaagaagttggaagaatgcatgatagaattgttggcggttcttcc 2613
            || |||| ||| ||||||||||| ||||| ||||| ||||| | |||   ||||||  ||
Sbjct: 75   cttgatcaagtatgcaaagaagtgggaaggatgcaggataggactgtgatcggttcagcc 134

                                                                        
Query: 2614 agatccttccgaatagcttccagtgcctctttaccggttctgaacaggtataatgcaaga 2673
            ||||| ||| | |||||| | | ||| || ||||||||||| ||||||||  | ||||||
Sbjct: 135  agatcattcaggatagctgcaaatgcatcattaccggttctcaacaggtaccacgcaaga 194

                                                    
Query: 2674 caagatgggagctcggatgaggaaagctcatccccctagt 2713
            || ||| | || || ||||||||||||| ||| |||||||
Sbjct: 195  caggatagaagttcagatgaggaaagcttatctccctagt 234


>gnl|LJGI|GO036858 similar to UniRef100_A7QAW0 Cluster: Chromosome chr5 scaffold_72,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr5 scaffold_72, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (21%)
          Length = 731

 Score = 61.9 bits (31), Expect = 2e-08
 Identities = 223/287 (77%)
 Strand = Plus / Plus

                                                                        
Query: 1800 atttcttaaagctgtgcttgatataccgtttgcatttaaaagagttgaagctatgctata 1859
            |||||||||||   ||||||||||||| |||||||| || ||||| || || ||||| ||
Sbjct: 150  atttcttaaagtcatgcttgatataccttttgcattcaagagagtggatgccatgcttta 209

                                                                        
Query: 1860 cagagcgaacttcgattcagaagtcaattaccttaggaagtcttttcaaaccctggaggc 1919
            ||  || || || ||||||||| |  | ||||||| |||||| ||| |||| || |||| 
Sbjct: 210  cattgctaattttgattcagaattagagtaccttaagaagtcctttgaaactctagaggt 269

                                                                        
Query: 1920 agcaagtgaagaattaaggaacagccggctattcttcaaactacttgaagctgttctcag 1979
             ||  |||| ||||||| ||| ||| |  | ||  | ||  |||||||||| ||||| ||
Sbjct: 270  ggcttgtgaggaattaaagaatagcagaatgtttctgaagatacttgaagcagttctgag 329

                                                                        
Query: 1980 gacaggaaacagaatgaatgttggcactaatagaggtgatgctaaagctttcaaactgga 2039
             ||||||||  | |||||||||||||| ||| | ||||||||  | || |||||||||||
Sbjct: 330  aacaggaaatcgtatgaatgttggcaccaatcgtggtgatgcacacgcattcaaactgga 389

                                                           
Query: 2040 aaccctattaaaacttgtagatataaagggaacagatggaaagacca 2086
             || ||  | ||  | || ||||| |||||||| |||||||||||||
Sbjct: 390  cactcttctgaagttagttgatattaagggaactgatggaaagacca 436


>gnl|LJGI|TC76831 similar to UniRef100_A2Q5W8 Cluster: Actin-binding FH2; n=1; Medicago
            truncatula|Rep: Actin-binding FH2 - Medicago truncatula
            (Barrel medic), partial (32%)
          Length = 1807

 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                        
Query: 1800 atttcttaaagctgtgcttgatataccgtttgcatttaaaagagttgaagctatgctata 1859
            |||||| || || ||||||| | |||| || ||||||||||| |||||||| ||||| ||
Sbjct: 563  atttctgaaggcggtgcttggtgtacctttcgcatttaaaagggttgaagcaatgcttta 622

                                                               
Query: 1860 cagagcgaacttcgattcagaagtcaattaccttaggaagtcttttcaaac 1910
            || ||| || || || ||||||||  | || |||||||| || ||||||||
Sbjct: 623  catagccaattttgagtcagaagtggaatatcttaggaaatcctttcaaac 673


>gnl|LJGI|TC71816 similar to UniRef100_A2Q5W8 Cluster: Actin-binding FH2; n=1; Medicago
            truncatula|Rep: Actin-binding FH2 - Medicago truncatula
            (Barrel medic), partial (16%)
          Length = 814

 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 2494 gcaaaggaagaagcccaccctttcagaatttttatgattgtaagagacttt 2544
            |||||||||||||| || || |||||||| || ||| ||||||||||||||
Sbjct: 330  gcaaaggaagaagctcatccattcagaatcttcatggttgtaagagacttt 380