Miyakogusa Predicted Gene

Lj2g3v1968170.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1968170.1 Non Chatacterized Hit- tr|K4ABY4|K4ABY4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si036391,49.23,0.0000000003,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Possibly involved in carbohydrate binding,X8;
seg,N,CUFF.38103.1
         (1041 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS348304 similar to UniRef100_A7PLP9 Cluster: Chromosom...  1013   0.0  
gnl|LJGI|BW622206 weakly similar to UniRef100_A7PLP9 Cluster: Ch...   478   e-134

>gnl|LJGI|FS348304 similar to UniRef100_A7PLP9 Cluster: Chromosome chr7 scaffold_20,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_20, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (24%)
          Length = 720

 Score = 1013 bits (511), Expect = 0.0
 Identities = 517/519 (99%)
 Strand = Plus / Minus

                                                                        
Query: 523  gaacccccattggttggtaaccctaaccctgctcctgaacctgaacctttgcctcctctg 582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720  gaacccccattggttggtaaccctaaccctgctcctgaacctgaacctttgcctcctctg 661

                                                                        
Query: 583  gctcaagtagtttcttcccctcctccaatgtctccttcttccacttttgcccctcctcaa 642
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660  gctcaagtagtttcttcccctcctccaatgtctccttcttccacttttgcccctcctcaa 601

                                                                        
Query: 643  gaacaaccttctcccttcattgatccagctagttctccttctcctcatggcttcttcacc 702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600  gaacaaccttctcccttcattgatccagctagttctccttctcctcatggcttcttcacc 541

                                                                        
Query: 703  ttgcctccttgcaatccaatcgacaatggctcgccctcgccttatccccacatggtcccg 762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540  ttgcctccttgcaatccaatcgacaatggctcgccctcgccttatccccacatggtcccg 481

                                                                        
Query: 763  gttcagaaactgtggtgtgttgcgaagcctagtgttcccgaagagacgctgcagcaggct 822
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480  gttcagaaactgtggtgtgttgcgaagcctagtgttcccgaagagacgctgcagcaggct 421

                                                                        
Query: 823  ttggactatgcttgtggagagggtggtgctgattgtactgagatcgcgccgcaggggaat 882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420  ttggactatgcttgtggagagggtggtgctgattgtactgagatcgcgccgcaggggaat 361

                                                                        
Query: 883  tgttacaacccagacacattggttgctcatgcttcttatgccttcaacagttactggcag 942
            |||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 360  tgttacaacccagacacattggttgctcatgcttcttaagccttcaacagtttctggcag 301

                                                                        
Query: 943  aagcataagaggaatggtggaacttgcagctttggagggactgctttgttggttcattct 1002
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300  aagcataagaggaatggtggaacttgcagctttggagggactgctttgttggttcattct 241

                                                   
Query: 1003 gatccaagttaccttcaatgtcagtttaatctcagctag 1041
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 240  gatccaagttaccttcaatgtcagtttaatctcagctag 202


>gnl|LJGI|BW622206 weakly similar to UniRef100_A7PLP9 Cluster: Chromosome chr7
           scaffold_20, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 468

 Score =  478 bits (241), Expect = e-134
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcggaaacttggcttagagccaatgttctagcacactaccccgcttcaaaaatcact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 atggcggaaacttggcttagagccaatgttctagcacactaccccgcttcaaaaatcact 287

                                                                       
Query: 61  aacgttgttgtgggaagctctgctttctgccaacaacaccaaaaacccaatcaagtttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 aacgttgttgtgggaagctctgctttctgccaacaacaccaaaaacccaatcaagtttta 347

                                                                       
Query: 121 gtcttgaatgctttgaaaaatgtttaccactcactgaaaaggtggggtttggagagagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtcttgaatgctttgaaaaatgtttaccactcactgaaaaggtggggtttggagagagaa 407

                                                                       
Query: 181 atcaaggtttctgttgctttctatttgagctgtttgagtcaaaactcaccttcttatgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atcaaggtttctgttgctttctatttgagctgtttgagtcaaaactcaccttcttatgaa 467

            
Query: 241 g 241
           |
Sbjct: 468 g 468