Miyakogusa Predicted Gene

Lj2g3v1953000.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1953000.1 Non Chatacterized Hit- tr|G7IU15|G7IU15_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,89.74,0,Q9FN15_ARATH_Q9FN15;,Uncharacterised protein family
Ycf36; DUF1230,Uncharacterised protein family Yc,CUFF.38084.1
         (942 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS350347 similar to UniRef100_A9RYR8 Cluster: Predicted...   182   3e-45

>gnl|LJGI|FS350347 similar to UniRef100_A9RYR8 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (10%)
          Length = 646

 Score =  182 bits (92), Expect = 3e-45
 Identities = 95/96 (98%)
 Strand = Plus / Plus

                                                                       
Query: 462 ggggtggagttatgttggagatagacttctatctgcggtcattccttatgaagaaagtgg 521
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggggtggagttatgttggagatacacttctatctgcggtcattccttatgaagaaagtgg 610

                                               
Query: 522 ttggtatgatggacagatgtgggtcaagccacctga 557
           ||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttggtatgatggacagatgtgggtcaagccacctga 646



 Score =  157 bits (79), Expect = 2e-37
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                       
Query: 385 gagcctctaagatttatactagctgctggaacaggaacactcttcattgtgtctttgatt 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 gagcctctaagatttatactagctgctggaacaggaacactcttcattgtgtctttgatt 199

                              
Query: 445 gtattgaggatttatctgg 463
           |||||||||||||||||||
Sbjct: 200 gtattgaggatttatctgg 218