Miyakogusa Predicted Gene
- Lj2g3v1952980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1952980.1 Non Chatacterized Hit- tr|I1GN11|I1GN11_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,66.15,6e-18,PROLYL 4-HYDROXYLASE ALPHA-1 SUBUNIT-RELATED,NULL;
PROLYL 4-HYDROXYLASE ALPHA SUBUNIT,NULL,CUFF.38082.1
(477 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57562 similar to UniRef100_Q75ZI4 Cluster: Prolyl 4-h... 946 0.0
gnl|LJGI|TC78300 similar to UniRef100_A7PLM6 Cluster: Chromosome... 115 3e-25
gnl|LJGI|TC79545 similar to UniRef100_A7QL42 Cluster: Chromosome... 98 6e-20
>gnl|LJGI|TC57562 similar to UniRef100_Q75ZI4 Cluster: Prolyl 4-hydroxylase; n=1;
Nicotiana tabacum|Rep: Prolyl 4-hydroxylase - Nicotiana
tabacum (Common tobacco), partial (86%)
Length = 1111
Score = 946 bits (477), Expect = 0.0
Identities = 477/477 (100%)
Strand = Plus / Plus
Query: 1 atgaaaatcaaaacggttagaggaaattggagttggagaacgaacaagatcgcgttccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atgaaaatcaaaacggttagaggaaattggagttggagaacgaacaagatcgcgttccct 123
Query: 61 tctgttttcctcttatgcatcttcttcttcctcgctggattcttcggttctactctcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tctgttttcctcttatgcatcttcttcttcctcgctggattcttcggttctactctcttc 183
Query: 121 tttcagtatcactctcaggaagatgagcatggactgaggcagattcagaggccgaggacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tttcagtatcactctcaggaagatgagcatggactgaggcagattcagaggccgaggacg 243
Query: 181 acgaggttgcttgagaatttgactgagaaggagacggagtcgcatttgttgcctgctgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 acgaggttgcttgagaatttgactgagaaggagacggagtcgcatttgttgcctgctgga 303
Query: 241 gagaccggtgacaatttcatcacaacgattccattccaggttttgagctggaaccctcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagaccggtgacaatttcatcacaacgattccattccaggttttgagctggaaccctcac 363
Query: 301 gctctatatttccctaattttgcaactgcagaacaatgtgaaagcataattgaaacggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gctctatatttccctaattttgcaactgcagaacaatgtgaaagcataattgaaacggca 423
Query: 361 aaggaaggactgaaaccatcaacattggtgttacgtgtgggagaaacagatgagagtaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aaggaaggactgaaaccatcaacattggtgttacgtgtgggagaaacagatgagagtaca 483
Query: 421 acgggaatcagaacaagctctggtgtctttattagcgcttttgaagataaaacgggg 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 acgggaatcagaacaagctctggtgtctttattagcgcttttgaagataaaacgggg 540
>gnl|LJGI|TC78300 similar to UniRef100_A7PLM6 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 500
Score = 115 bits (58), Expect = 3e-25
Identities = 202/250 (80%)
Strand = Plus / Plus
Query: 224 atttgttgcctgctggagagaccggtgacaatttcatcacaacgattccattccaggttt 283
||||| || |||| |||||| ||||||| ||| ||||||| ||||||| || |||||||
Sbjct: 224 atttgatgactgcaggagagttcggtgacgattccatcacatcgattccttttcaggttt 283
Query: 284 tgagctggaaccctcacgctctatatttccctaattttgcaactgcagaacaatgtgaaa 343
|||||||||| |||| ||||||||||| || |||||||| ||||| ||||||||| |||
Sbjct: 284 tgagctggaagcctcgagctctatattttccgaattttgcgactgcggaacaatgtaaaa 343
Query: 344 gcataattgaaacggcaaaggaaggactgaaaccatcaacattggtgttacgtgtgggag 403
| ||| ||| ||||||| || || || |||||| | |||| |||||| | |||||
Sbjct: 344 gtatagttggtgtagcaaaggctggcctcaagccatcagcgttggcgttacgcgagggag 403
Query: 404 aaacagatgagagtacaacgggaatcagaacaagctctggtgtctttattagcgcttttg 463
|||| || ||| ||| | |||||| ||||||||||||||||| ||| |||| ||| ||
Sbjct: 404 aaaccgagcagaataccaagggaattagaacaagctctggtgtgtttgttagttcttctg 463
Query: 464 aagataaaac 473
| ||||||||
Sbjct: 464 aggataaaac 473
Score = 93.7 bits (47), Expect = 9e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 67 ttcctcttatgcatcttcttcttcctcgctggattcttcggttctactctcttct 121
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 94 ttcctcatatgcatcttcttcttcctcgctggattcttcggttccactctcttct 148
>gnl|LJGI|TC79545 similar to UniRef100_A7QL42 Cluster: Chromosome chr3 scaffold_117,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_117, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 574
Score = 97.6 bits (49), Expect = 6e-20
Identities = 103/121 (85%)
Strand = Plus / Plus
Query: 224 atttgttgcctgctggagagaccggtgacaatttcatcacaacgattccattccaggttt 283
||||| || |||| |||||| ||||||| ||| ||||||| ||||||| || |||||||
Sbjct: 250 atttgatgactgcaggagagttcggtgacgattccatcacatcgattccttttcaggttt 309
Query: 284 tgagctggaaccctcacgctctatatttccctaattttgcaactgcagaacaatgtgaaa 343
|||||||||| |||| ||||||||||| || |||||||| ||||| ||||||||| |||
Sbjct: 310 tgagctggaagcctcgagctctatattttccgaattttgcgactgcggaacaatgtaaaa 369
Query: 344 g 344
|
Sbjct: 370 g 370
Score = 93.7 bits (47), Expect = 9e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 67 ttcctcttatgcatcttcttcttcctcgctggattcttcggttctactctcttct 121
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 120 ttcctcatatgcatcttcttcttcctcgctggattcttcggttccactctcttct 174