Miyakogusa Predicted Gene
- Lj2g3v1931930.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1931930.1 tr|G7K3X2|G7K3X2_MEDTR Sigma factor sigB
regulation protein rsbQ OS=Medicago truncatula
GN=MTR_2g089,87.78,0,Abhydrolase_6,NULL; SIGMA FACTOR SIGB REGULATION
PROTEIN RSBQ,NULL; ALPHA/BETA HYDROLASE FOLD-CONTAI,CUFF.38077.1
(867 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67319 similar to UniRef100_Q10J20 Cluster: Hydrolase,... 1195 0.0
gnl|LJGI|TC74690 similar to UniRef100_Q10J20 Cluster: Hydrolase,... 987 0.0
gnl|LJGI|TC61009 similar to UniRef100_Q10J20 Cluster: Hydrolase,... 367 e-101
gnl|LJGI|BP072997 similar to UniRef100_Q10J20 Cluster: Hydrolase... 236 2e-61
>gnl|LJGI|TC67319 similar to UniRef100_Q10J20 Cluster: Hydrolase, alpha/beta fold
family protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Hydrolase, alpha/beta fold family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(73%)
Length = 746
Score = 1195 bits (603), Expect = 0.0
Identities = 603/603 (100%)
Strand = Plus / Plus
Query: 1 atggggatagtggaggaagctcacaacgtgaaagttctaggatcaggtactagggctatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atggggatagtggaggaagctcacaacgtgaaagttctaggatcaggtactagggctatc 203
Query: 61 gttcttgctcatggattcggcacggaccagtccctatggaaacacttcgtaccttacctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gttcttgctcatggattcggcacggaccagtccctatggaaacacttcgtaccttacctc 263
Query: 121 accaacgattttcgtgtcatcctctacgacaacatgggtgctggaacaaccaaccctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 accaacgattttcgtgtcatcctctacgacaacatgggtgctggaacaaccaaccctgag 323
Query: 181 tacttcgatttcgagcgtcactcaagcttagaaggctatgcctacgatttgctttcgatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tacttcgatttcgagcgtcactcaagcttagaaggctatgcctacgatttgctttcgatt 383
Query: 241 ttggaagagcttcgtgtcgattcgtgcatcttcgtcggccactctgtttccgccatgatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttggaagagcttcgtgtcgattcgtgcatcttcgtcggccactctgtttccgccatgatc 443
Query: 301 ggcgctgttgcttccatttcacgccctgatctcttctccaaaatcatcatggttggagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggcgctgttgcttccatttcacgccctgatctcttctccaaaatcatcatggttggagct 503
Query: 361 tcccccaggtatttgaacgacgtgaattactatggaggatttgagcaggaagatttgaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcccccaggtatttgaacgacgtgaattactatggaggatttgagcaggaagatttgaac 563
Query: 421 caattgttcgatgcgatggcggcgaattacaaagcgtggtgtttagggtttgctccgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caattgttcgatgcgatggcggcgaattacaaagcgtggtgtttagggtttgctccgctg 623
Query: 481 gcggtgggtggagacatggagtcggtggcggtgcaggagtttagcagaaccttgttcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcggtgggtggagacatggagtcggtggcggtgcaggagtttagcagaaccttgttcaac 683
Query: 541 atgaggccggatattgctctaaccgtttcgcggaccatttttcagagcgacatgaggggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atgaggccggatattgctctaaccgtttcgcggaccatttttcagagcgacatgaggggg 743
Query: 601 att 603
|||
Sbjct: 744 att 746
>gnl|LJGI|TC74690 similar to UniRef100_Q10J20 Cluster: Hydrolase, alpha/beta fold
family protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Hydrolase, alpha/beta fold family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(55%)
Length = 692
Score = 987 bits (498), Expect = 0.0
Identities = 500/501 (99%)
Strand = Plus / Plus
Query: 367 aggtatttgaacgacgtgaattactatggaggatttgagcaggaagatttgaaccaattg 426
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 18 aggtatttgaacgacgtgaattactatggaggattngagcaggaagatttgaaccaattg 77
Query: 427 ttcgatgcgatggcggcgaattacaaagcgtggtgtttagggtttgctccgctggcggtg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 ttcgatgcgatggcggcgaattacaaagcgtggtgtttagggtttgctccgctggcggtg 137
Query: 487 ggtggagacatggagtcggtggcggtgcaggagtttagcagaaccttgttcaacatgagg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ggtggagacatggagtcggtggcggtgcaggagtttagcagaaccttgttcaacatgagg 197
Query: 547 ccggatattgctctaaccgtttcgcggaccatttttcagagcgacatgagggggattttg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ccggatattgctctaaccgtttcgcggaccatttttcagagcgacatgagggggattttg 257
Query: 607 agccttgtcactgtgccgtgccatatcatacaagcgcagaaggacatggcggttccggtg 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agccttgtcactgtgccgtgccatatcatacaagcgcagaaggacatggcggttccggtg 317
Query: 667 gtggtttctgagtttctccaccagcatcttggtggcgtgtctattgtggaggttatggca 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gtggtttctgagtttctccaccagcatcttggtggcgtgtctattgtggaggttatggca 377
Query: 727 actgatggtcatttgccgcagttgagctcgccggatattgttattccggttctgctcaag 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 actgatggtcatttgccgcagttgagctcgccggatattgttattccggttctgctcaag 437
Query: 787 cacattcatcttgatattgagcccagattgcaagatgtaagtagtggtgtgtgttgtgat 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cacattcatcttgatattgagcccagattgcaagatgtaagtagtggtgtgtgttgtgat 497
Query: 847 gtaaaatttagtggggtgtaa 867
|||||||||||||||||||||
Sbjct: 498 gtaaaatttagtggggtgtaa 518
>gnl|LJGI|TC61009 similar to UniRef100_Q10J20 Cluster: Hydrolase, alpha/beta fold
family protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Hydrolase, alpha/beta fold family protein,
expressed - Oryza sativa subsp. japonica (Rice),
complete
Length = 1185
Score = 367 bits (185), Expect = e-101
Identities = 631/779 (81%), Gaps = 3/779 (0%)
Strand = Plus / Plus
Query: 1 atggggatagtggaggaagctcacaacgtgaaagttctaggatcaggtactagggctatc 60
|||||||||||||| |||||||||||||| ||||| ||||||||||| | ||| ||
Sbjct: 43 atggggatagtggaagaagctcacaacgtcaaagtcttaggatcaggttcaaggttcata 102
Query: 61 gttcttgctcatggattcggcacggaccagtccctatggaaacacttcgtacctta---c 117
||||| ||||| || |||||||| ||||| ||| | ||||||||| | || ||| | |
Sbjct: 103 gttctagctcacggtttcggcaccgaccaatccgtgtggaaacaccttgtccctcacctc 162
Query: 118 ctcaccaacgattttcgtgtcatcctctacgacaacatgggtgctggaacaaccaaccct 177
|||| | |||| ||||| ||| | ||||||||||||||||| |||||||| ||||| |||
Sbjct: 163 ctcaacgacgactttcgcgtccttctctacgacaacatgggagctggaaccaccaatcct 222
Query: 178 gagtacttcgatttcgagcgtcactcaagcttagaaggctatgcctacgatttgctttcg 237
|| ||||||||||| || || |||||| |||| ||||| |||| || || ||||| |
Sbjct: 223 gattacttcgattttgaccgctactcaaccttacaaggccatgcttatgacttgctcgcc 282
Query: 238 attttggaagagcttcgtgtcgattcgtgcatcttcgtcggccactctgtttccgccatg 297
|| || |||||||||| ||| || |||||||| || || ||||| ||||| | ||||
Sbjct: 283 atcttagaagagcttcaagtccgctcttgcatctttgttggtcactcagtttctggcatg 342
Query: 298 atcggcgctgttgcttccatttcacgccctgatctcttctccaaaatcatcatggttgga 357
|| || | ||||||| ||||| || |||||||| |||||||| ||||||||||| |
Sbjct: 343 attggtaccattgcttcaatttctcgtcctgatcttttctccaagctcatcatggtttca 402
Query: 358 gcttcccccaggtatttgaacgacgtgaattactatggaggatttgagcaggaagatttg 417
||||| ||||||||||||||||| || |||||| ||||| |||||||| |||||||||
Sbjct: 403 gcttcgcccaggtatttgaacgatgtagattacttcggaggctttgagcaagaagatttg 462
Query: 418 aaccaattgttcgatgcgatggcggcgaattacaaagcgtggtgtttagggtttgctccg 477
|||| || |||||||| |||||||||||||||||||| ||||||| ||| | || |||
Sbjct: 463 gaccagttattcgatgccatggcggcgaattacaaagcatggtgttcaggctgggccccg 522
Query: 478 ctggcggtgggtggagacatggagtcggtggcggtgcaggagtttagcagaaccttgttc 537
|||| | || |||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct: 523 atggctatcggaggagacatggagtcagtggcggtgcaggaattcagcagaaccttgttc 582
Query: 538 aacatgaggccggatattgctctaaccgtttcgcggaccatttttcagagcgacatgagg 597
||||||||||| || || || ||| ||| | || ||| |||||||| || |||||||||
Sbjct: 583 aacatgaggccagacatagccttaagcgtattgcagacaatttttcaaagtgacatgagg 642
Query: 598 gggattttgagccttgtcactgtgccgtgccatatcatacaagcgcagaaggacatggcg 657
| | ||||| || |||||||| || || ||||||||| |||| ||| |||||
Sbjct: 643 caagtactaagcctggtaactgtgccatgtcacatcatacaaagcaagaaagacctggcg 702
Query: 658 gttccggtggtggtttctgagtttctccaccagcatcttggtggcgtgtctattgtggag 717
|| ||||| ||||| | |||| ||||||||||||| |||| || | |||||| ||||||
Sbjct: 703 gtcccggtagtggtggcggagtatctccaccagcatgttggcggtgagtctatcgtggag 762
Query: 718 gttatggcaactgatggtcatttgccgcagttgagctcgccggatattgttattccggt 776
|| ||| |||| || || |||||||||||| |||||||||||||||||||| |||||||
Sbjct: 763 gtcatgtcaacggaggggcatttgccgcagctgagctcgccggatattgttgttccggt 821
>gnl|LJGI|BP072997 similar to UniRef100_Q10J20 Cluster: Hydrolase, alpha/beta fold
family protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Hydrolase, alpha/beta fold family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(7%)
Length = 390
Score = 236 bits (119), Expect = 2e-61
Identities = 119/119 (100%)
Strand = Plus / Minus
Query: 749 tgagctcgccggatattgttattccggttctgctcaagcacattcatcttgatattgagc 808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tgagctcgccggatattgttattccggttctgctcaagcacattcatcttgatattgagc 331
Query: 809 ccagattgcaagatgtaagtagtggtgtgtgttgtgatgtaaaatttagtggggtgtaa 867
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ccagattgcaagatgtaagtagtggtgtgtgttgtgatgtaaaatttagtggggtgtaa 272