Miyakogusa Predicted Gene

Lj2g3v1925810.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1925810.1 CUFF.38074.1
         (445 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73966 homologue to UniRef100_Q2PYX8 Cluster: RRM-cont...    64   8e-10
gnl|LJGI|TC63476 homologue to UniRef100_A7NYL7 Cluster: Chromoso...    64   8e-10

>gnl|LJGI|TC73966 homologue to UniRef100_Q2PYX8 Cluster: RRM-containing RNA-binding
           protein-like protein; n=1; Solanum tuberosum|Rep:
           RRM-containing RNA-binding protein-like protein -
           Solanum tuberosum (Potato), partial (25%)
          Length = 523

 Score = 63.9 bits (32), Expect = 8e-10
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 272 cagatgatggggaagtcggagcgttcccaaccgtcg 307
           |||||||| |||||||||||||||||||||||||||
Sbjct: 219 cagatgatagggaagtcggagcgttcccaaccgtcg 184


>gnl|LJGI|TC63476 homologue to UniRef100_A7NYL7 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (63%)
          Length = 1012

 Score = 63.9 bits (32), Expect = 8e-10
 Identities = 35/36 (97%)
 Strand = Plus / Minus

                                               
Query: 272 cagatgatggggaagtcggagcgttcccaaccgtcg 307
           |||||||| |||||||||||||||||||||||||||
Sbjct: 203 cagatgatagggaagtcggagcgttcccaaccgtcg 168