Miyakogusa Predicted Gene
- Lj2g3v1925720.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1925720.2 tr|F2EFC3|F2EFC3_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,35.19,0.000000000000002,seg,NULL; coiled-coil,NULL;
LOW-TEMPERATURE VIABILITY PROTEIN LTV1-RELATED,NULL,CUFF.38069.2
(1569 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72891 similar to UniRef100_A7NT18 Cluster: Chromosome... 1487 0.0
gnl|LJGI|TC63516 similar to UniRef100_A7NT18 Cluster: Chromosome... 1106 0.0
gnl|LJGI|FS334950 similar to UniRef100_A7NT18 Cluster: Chromosom... 948 0.0
gnl|LJGI|FS320100 similar to UniRef100_A7NT18 Cluster: Chromosom... 884 0.0
gnl|LJGI|TC70145 similar to UniRef100_A7NT18 Cluster: Chromosome... 755 0.0
gnl|LJGI|FS320793 similar to UniRef100_A7NT18 Cluster: Chromosom... 307 1e-82
>gnl|LJGI|TC72891 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1422
Score = 1487 bits (750), Expect = 0.0
Identities = 796/810 (98%), Gaps = 1/810 (0%)
Strand = Plus / Plus
Query: 758 gtgacaaaccgagagctcgtcgtttgttggatgaacaatttgatttactggaacgtcaag 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgacaaaccgagagctcgtcgtttgttggatgaacaatttgatttactggaacgtcaag 60
Query: 818 agtatgcaaccgatgattacggtgaagatgatgatgatgatggtgaactttatggaaatt 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agtatgcaaccgatgattacggtgaagatgatgatgatgatggtgaactttatggaaatt 120
Query: 878 atcaagctgaagatgagttccttgctgagaagctcaaagcctctcttaacaaccacacga 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atcaagctgaagatgagttccttgctgagaagctcaaagcctctcttaacaaccacacga 180
Query: 938 tggacagcctagaacctgatgacgacacttacaaggttcctgcagatttattgaagaaaa 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggacagcctagaacctgatgacgacacttacaaggttcctgcagatttattgaagaaaa 240
Query: 998 atgaggccccaaatagcgaggagcaagaggactttgctgctgatttgattcgccgtacta 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgaggccccaaatagcgaggagcaagaggactttgctgctgatttgattcgccgtacta 300
Query: 1058 aggaatatggtgaggggtatgaagttgaagatgaagataaggatgttatacttgtccaag 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggaatatggtgaggggtatgaagttgaagatgaagataaggatgttatacttgtccaag 360
Query: 1118 aaagtagtgatgaatcagaagtttgggattgtgagactattgtttcaacgtactcaaatc 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagtagtgatgaatcagaagtttgggattgtgagactattgtttcaacgtactcaaatc 420
Query: 1178 tagataaccaccctgggaagattgaagctcctggtgtagctaggaaaaagaaattggctg 1237
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 421 tagataaccaccctggtaagattgaagttcctggtgtagctaggaaaaagaaattggctg 480
Query: 1238 aaactatgtctgcagccttgagttcctctagtccaataatttccctga-ggggaaaagag 1296
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 481 aaactatgtctgcagccttgagttcctctagtccaataatttccctgacggggaaaagag 540
Query: 1297 aaactccctgtagacttcttgcctggggctaaaaaacctgctactgaaaaggttaaaggc 1356
|||||||||||||||||||||||||||| || ||||||| |||| |||||||||||||||
Sbjct: 541 aaactccctgtagacttcttgcctgggggtagaaaaccttctaccgaaaaggttaaaggc 600
Query: 1357 ccgagcaatgcaagtactgagcagtacaagagaaaacaacatggcctagagtcaaaggag 1416
| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct: 601 ctgagcaatgcaaatactgaacagtacacgagaaaacaacatggcctagagtcaaaggag 660
Query: 1417 gagaagaaagaacgaaaggctgctgtgaaggaggaaaggcgtgaggcacgacgcgttaaa 1476
|||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 661 gagaagaaagaacgaaaggctgctgtaaaggaggaaaggcgtgaggcacgacgtgttaaa 720
Query: 1477 aaagaaatgaaagagctttataagggtgaagcacatcgcgcacaaagagctgctgctgta 1536
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 721 aaagaaatgaaagagctttataagggtgaagcacatcgggcacaaagagctgctgctgta 780
Query: 1537 tctggtccttcttccattcatctcatgtaa 1566
||||||||||||||||||||||||||||||
Sbjct: 781 tctggtccttcttccattcatctcatgtaa 810
>gnl|LJGI|TC63516 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 672
Score = 1106 bits (558), Expect = 0.0
Identities = 558/558 (100%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 174
Query: 61 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 234
Query: 121 cccctttccaatgactctatttttgatgatgcccccgaggactgtgatgacaatgacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 cccctttccaatgactctatttttgatgatgcccccgaggactgtgatgacaatgacagc 294
Query: 181 ctcaacggggatgaaggtgcgttgccagatgatgtgaggagggaaattctagaactaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 ctcaacggggatgaaggtgcgttgccagatgatgtgaggagggaaattctagaactaggg 354
Query: 241 tttccggatgatggctataactacttggatcatatgagggaaattaagaatactggtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tttccggatgatggctataactacttggatcatatgagggaaattaagaatactggtggt 414
Query: 301 ggttctgctttctttaacaaccccaagttcaagcttcaacacgttcctcgtgatattaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ggttctgctttctttaacaaccccaagttcaagcttcaacacgttcctcgtgatattaag 474
Query: 361 gcgtatgatgcttcgagattacaaatttcagaggcggataaagagcccgaggaaaacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcgtatgatgcttcgagattacaaatttcagaggcggataaagagcccgaggaaaacact 534
Query: 421 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 594
Query: 481 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctgatgttgaagatttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctgatgttgaagatttg 654
Query: 541 gaggaagactttgttgta 558
||||||||||||||||||
Sbjct: 655 gaggaagactttgttgta 672
>gnl|LJGI|FS334950 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 795
Score = 948 bits (478), Expect = 0.0
Identities = 481/482 (99%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 373
Query: 61 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 374 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagtggacaacaat 433
Query: 121 cccctttccaatgactctatttttgatgatgcccccgaggactgtgatgacaatgacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cccctttccaatgactctatttttgatgatgcccccgaggactgtgatgacaatgacagc 493
Query: 181 ctcaacggggatgaaggtgcgttgccagatgatgtgaggagggaaattctagaactaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ctcaacggggatgaaggtgcgttgccagatgatgtgaggagggaaattctagaactaggg 553
Query: 241 tttccggatgatggctataactacttggatcatatgagggaaattaagaatactggtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tttccggatgatggctataactacttggatcatatgagggaaattaagaatactggtggt 613
Query: 301 ggttctgctttctttaacaaccccaagttcaagcttcaacacgttcctcgtgatattaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ggttctgctttctttaacaaccccaagttcaagcttcaacacgttcctcgtgatattaag 673
Query: 361 gcgtatgatgcttcgagattacaaatttcagaggcggataaagagcccgaggaaaacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcgtatgatgcttcgagattacaaatttcagaggcggataaagagcccgaggaaaacact 733
Query: 421 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 793
Query: 481 gt 482
||
Sbjct: 794 gt 795
>gnl|LJGI|FS320100 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 811
Score = 884 bits (446), Expect = 0.0
Identities = 553/588 (94%), Gaps = 3/588 (0%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 227 atggggaagaagaaattcattgacaagaaaaatgctgctactttccaacttattgctcgt 286
Query: 61 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 120
|||||||||||||| ||||||||||| || ||||| |||||| ||||||| |||||||||
Sbjct: 287 gactcctcggacccggcattctccacgtcagaccgcgtcttcatccgagtcgacaacaat 346
Query: 121 cccctttccaatgactctatttttgatgatgcccccgaggactgtgatgacaatgacagc 180
|||||||||| ||||||||||||||| ||||||||||||||| |||||| |||| |||
Sbjct: 347 cccctttccactgactctatttttgacgatgcccccgaggacattgatgatgatgagagc 406
Query: 181 ctcaacggggatgaaggtgcgttgccagatgatgtgaggagggaaattctagaactaggg 240
|||| | | ||||||| ||||||| || ||||||||||||||||||||||||||||||
Sbjct: 407 ctcagtgaaggtgaaggttcgttgccggaggatgtgaggagggaaattctagaactaggg 466
Query: 241 tttccggatgatggctataactacttggatcatatgagggaaattaagaatactggtggt 300
||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 467 tttccagatgatggatataactacttgaatcatatgagggaaattaagaatactggtggt 526
Query: 301 ggttctgctttctttaacaaccccaagttcaagcttcaacacgttcctcgtgatattaag 360
||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 527 ggttctgctttctttcacaatcccaagttcaagcttcaacacgttcctcatgatattaag 586
Query: 361 gcgtatgatgcttcgagattacaaatttcagaggcggataaagagcccgaggaaaacact 420
|||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct: 587 gcgtatgatgcttcgagattaccaatttcagaggcggatagagagcctgaggaaaacact 646
Query: 421 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 atatacactgttgcagccaagactaccagcataagggttcagaaagcaattgatcctgaa 706
Query: 481 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctgatgttgaagatttg 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 707 gtagctgcgctgcttgatgatactgatttgtcacggtttggttctga---tgaagatttg 763
Query: 541 gaggaagactttgttgtacaagctaaccttgatgaggatgaaaatgat 588
||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 764 gaggaagactttgttgtacaagctaaccttggtgaggatgaaaatgat 811
>gnl|LJGI|TC70145 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 823
Score = 755 bits (381), Expect = 0.0
Identities = 381/381 (100%)
Strand = Plus / Plus
Query: 1189 cctgggaagattgaagctcctggtgtagctaggaaaaagaaattggctgaaactatgtct 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgggaagattgaagctcctggtgtagctaggaaaaagaaattggctgaaactatgtct 60
Query: 1249 gcagccttgagttcctctagtccaataatttccctgaggggaaaagagaaactccctgta 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcagccttgagttcctctagtccaataatttccctgaggggaaaagagaaactccctgta 120
Query: 1309 gacttcttgcctggggctaaaaaacctgctactgaaaaggttaaaggcccgagcaatgca 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacttcttgcctggggctaaaaaacctgctactgaaaaggttaaaggcccgagcaatgca 180
Query: 1369 agtactgagcagtacaagagaaaacaacatggcctagagtcaaaggaggagaagaaagaa 1428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agtactgagcagtacaagagaaaacaacatggcctagagtcaaaggaggagaagaaagaa 240
Query: 1429 cgaaaggctgctgtgaaggaggaaaggcgtgaggcacgacgcgttaaaaaagaaatgaaa 1488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaaaggctgctgtgaaggaggaaaggcgtgaggcacgacgcgttaaaaaagaaatgaaa 300
Query: 1489 gagctttataagggtgaagcacatcgcgcacaaagagctgctgctgtatctggtccttct 1548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gagctttataagggtgaagcacatcgcgcacaaagagctgctgctgtatctggtccttct 360
Query: 1549 tccattcatctcatgtaagtt 1569
|||||||||||||||||||||
Sbjct: 361 tccattcatctcatgtaagtt 381
>gnl|LJGI|FS320793 similar to UniRef100_A7NT18 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 767
Score = 307 bits (155), Expect = 1e-82
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 1 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atggggaagaagaaattcattgacaagagaaatgctgctactttccaacttattgctcgt 672
Query: 61 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gactcctcggacccagcattctccacctcggaccgtgtcttcgtccgagttgacaacaat 732
Query: 121 cccctttccaatgactctatttttgatgatgcccc 155
|||||||||||||||||||||||||||||||||||
Sbjct: 733 cccctttccaatgactctatttttgatgatgcccc 767