Miyakogusa Predicted Gene
- Lj2g3v1904510.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1904510.1 Non Chatacterized Hit- tr|I3SFC1|I3SFC1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,97.58,0,Cyclin-like,Cyclin-like; no description,Cyclin-like;
Cyclin_N,Cyclin, N-terminal; Cyclin_C,Cyclin, C,CUFF.38053.1
(993 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO009757 similar to UniRef100_Q2ABE6 Cluster: Cyclin D3... 1233 0.0
gnl|LJGI|TC65276 similar to UniRef100_A7PLG7 Cluster: Chromosome... 291 4e-78
gnl|LJGI|TC58388 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3;... 54 2e-06
>gnl|LJGI|GO009757 similar to UniRef100_Q2ABE6 Cluster: Cyclin D3-2; n=1; Camellia
sinensis|Rep: Cyclin D3-2 - Camellia sinensis (Tea),
partial (32%)
Length = 744
Score = 1233 bits (622), Expect = 0.0
Identities = 660/666 (99%), Gaps = 5/666 (0%)
Strand = Plus / Plus
Query: 1 atgcctcaacaacactctccctcttccctcaacatccttctctgccaagaacaatgcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atgcctcaacaacactctccctcttccctcaacatccttctctgccaagaacaatgcact 110
Query: 61 ttccacaacaacactctcccatctttacctttgatttcgctcgacaatgaagacgattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 ttccacaacaacactctcccatctttacctttgatttcgctcgacaatgaagacgattac 170
Query: 121 ctcaccactctaatctccaaagagaaagcaacccatttccattcccctgctgatggaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ctcaccactctaatctccaaagagaaagcaacccatttccattcccctgctgatggaatc 230
Query: 181 ctagcttctcatgagggtcatcgccatgatgctgttcgctggatttctggagtttcagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 ctagcttctcatgagggtcatcgccatgatgctgttcgctggatttctggagtttcagct 290
Query: 241 ttctatggtttcactgctttgaccactgttcttgcagttaactactttgacaggttcgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttctatggtttcactgctttgaccactgttcttgcagttaactactttgacaggttcgta 350
Query: 301 tcgaccctgaagtttcagatggataagccatggatgactcacctcactgcagtcacctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tcgaccctgaagtttcagatggataagccatggatgactcacctcactgcagtcacctgt 410
Query: 361 ttgtctcttgctgcaaaaatggaagaaacccaagtgccacttcttttggaccttcagcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttgtctcttgctgcaaaaatggaagaaacccaagtgccacttcttttggaccttcagcaa 470
Query: 421 gtggaggaatcagagttcttgtttgaagcaaagaccatacagagaatggagctacttgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gtggaggaatcagagttcttgtttgaagcaaagaccatacagagaatggagctacttgtg 530
Query: 481 ttgtcaactcttaattggagaatgaaccctgttaccccaatttccttctttcaatgcgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttgtcaactcttaattggagaatgaaccctgttaccccaatttccttctttcaatgcgtt 590
Query: 541 gtcacaaggcttggtttcatgaatggcttgctttctgagtttctgtgtaggtgcgaacga 600
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 591 gtcacaaggcttagtttcatgaatggcttgctttctgagtttctgtgta-gtgcgaacga 649
Query: 601 gttcttctctgtctcattgtggattcaagggttatgagctatcccccttctacattggct 660
||||||||||||||||||||||| ||||||| |||||||||| ||||||||||| |||||
Sbjct: 650 gttcttctctgtctcattgtgga-tcaaggg-tatgagctat-ccccttctaca-tggct 705
Query: 661 gctgca 666
||||||
Sbjct: 706 gctgca 711
>gnl|LJGI|TC65276 similar to UniRef100_A7PLG7 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 1496
Score = 291 bits (147), Expect = 4e-78
Identities = 532/659 (80%), Gaps = 6/659 (0%)
Strand = Plus / Plus
Query: 254 ctgctttgaccactgttcttgcagttaactactttgacaggttcgtatcgaccctgaagt 313
|||||||||| ||||||||||| || | ||||||||| |||||| | | | || | ||
Sbjct: 441 ctgctttgactactgttcttgctgtgagctactttgataggttcattactagccccaggt 500
Query: 314 ttcagatggataagccatggatgactcacctcactgcagtcacctgtttgtctcttgctg 373
|||| | ||| |||||||||||||| || || | ||| || | ||||||||||| ||||
Sbjct: 501 ttcaaagggacaagccatggatgacgcagcttagtgctgttgcgtgtttgtctctggctg 560
Query: 374 caaaaatggaagaaacccaagtgccacttcttttggaccttcagcaagtggaggaatcag 433
| ||| |||| || ||||| ||||| ||| | ||||| ||||| |||||||||||||
Sbjct: 561 ctaaagtggaggagacccatgtgcctcttttgttggatcttca---agtggaggaatcaa 617
Query: 434 agttcttgtttgaagcaaagaccatacagagaatggagctacttgtgttgtcaactctta 493
|||| |||||||||||||||| ||||||||||||||||| || || ||||||||||| |
Sbjct: 618 ggttcgtgtttgaagcaaagactatacagagaatggagcttctagttttgtcaactctga 677
Query: 494 attggagaatgaaccctgttaccccaatttccttctttcaatgcgttgtcacaaggcttg 553
| ||||| ||| | ||||| |||||||||||||||||| || | || ||| ||||||||
Sbjct: 678 aatggaggatgcatcctgtgaccccaatttccttctttgaacacattatcagaaggcttg 737
Query: 554 gtttcatgaatggcttgctttctgagtttctgtgtaggtgcgaacgagttcttctctgtc 613
|||| | || |||||| | || || |||| | || || |||||||||||| |
Sbjct: 738 gtttaaagacccgcttgcactgggaattcttgtggcgctgtgagcgagttcttctcaatg 797
Query: 614 tcattgtggattcaagggttatgagctatcccccttctacattggctgctgcaacaatga 673
||||| ||||||||||||||||| |||| |||||||||||||||||||| ||||||
Sbjct: 798 tcattccagattcaagggttatgagttatcttccttctacattggctgctgctgcaatga 857
Query: 674 tccatatcattaaagagattgaaccgtttaatgcaacagaatacacagatcaacttttgg 733
||||| | ||||||||||||||||| ||||||||||| || |||| ||||| ||| |||
Sbjct: 858 tccatgttattaaagagattgaaccatttaatgcaactgagtacattgatcagcttatgg 917
Query: 734 atttactcaaaattagtgaggaacaagtgaatgagtgctacaaaatcatgctgaaactat 793
|||||| || || ||||||||||||||||| |||||||||| |||| ||||| || |
Sbjct: 918 gtttactgaagataagtgaggaacaagtgaaccagtgctacaagctcatactgaagctgt 977
Query: 794 tagtttgctgtggtgatgttcacaatcttcaccaaaagcgtaaacgcctttatgaaccaa 853
|||| |||| || | || ||||||||||| ||||| || || | |||||| |
Sbjct: 978 tagtctgctatgaaggcatttccaatcttcacccgaagcgcaagcg---atctgaaccga 1034
Query: 854 gtagccccggtggagtcattgatgcatctttcagctgtgacagctcaaatgattcatgg 912
||||||| || || || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 gtagcccggggggtgttattgatgcatctttcagctgtgacagctcaaatgattcatgg 1093
>gnl|LJGI|TC58388 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(45%)
Length = 885
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 382 gaagaaacccaagtgccacttcttttggaccttca 416
||||||||||||||||||||||| || ||||||||
Sbjct: 775 gaagaaacccaagtgccacttctcttagaccttca 809