Miyakogusa Predicted Gene
- Lj2g3v1904470.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1904470.2 Non Chatacterized Hit- tr|B8ACT4|B8ACT4_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,85.71,0.078,Rer1,Retrieval of early ER protein Rer1; PROTEIN
RER1,Retrieval of early ER protein Rer1,CUFF.38046.2
(576 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75781 similar to UniRef100_A7PLG2 Cluster: Chromosome... 1134 0.0
gnl|LJGI|TC73458 similar to UniRef100_A7PLG2 Cluster: Chromosome... 347 5e-95
gnl|LJGI|BP043461 similar to UniRef100_A7PLG2 Cluster: Chromosom... 212 2e-54
gnl|LJGI|FS338455 similar to UniRef100_A7P8Y5 Cluster: Chromosom... 92 5e-18
gnl|LJGI|TC75451 similar to UniRef100_A7P8Y5 Cluster: Chromosome... 92 5e-18
gnl|LJGI|TC63902 similar to UniRef100_A7P8Y5 Cluster: Chromosome... 92 5e-18
>gnl|LJGI|TC75781 similar to UniRef100_A7PLG2 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1187
Score = 1134 bits (572), Expect = 0.0
Identities = 575/576 (99%)
Strand = Plus / Plus
Query: 1 atggaggttggcggcgaagtttcaccggaaaccgcgatatctcgatggaagttggggcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 80 atggaggttggcggcgaagtttcaccggaaaccgcgatatctcgatggaagttggggcta 139
Query: 61 tcgcagcagtatcagcacatgctcgacaagaccaccccgcacgtactacggcgttgggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tcgcagcagtatcagcacatgctcgacaagaccaccccgcacgtactacggcgttgggtt 199
Query: 121 ggttgcttggtggtggcctccatctacgtcctccgtgtctacctggtggagggcttctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggttgcttggtggtggcctccatctacgtcctccgtgtctacctggtggagggcttctac 259
Query: 181 atcgtctcctacgctctcggcatctacatcctcaacctcctcatcggtttcctctcccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atcgtctcctacgctctcggcatctacatcctcaacctcctcatcggtttcctctcccct 319
Query: 241 caggtcgatcccgaggtttacgacgacggccccaccctccctacctccggatccgatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caggtcgatcccgaggtttacgacgacggccccaccctccctacctccggatccgatgag 379
Query: 301 ttccgccctttcgttcgccgtattcccgagttcaaattctggtactcgatcacaaaggcc 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttccgccctttcgttcgccgtcttcccgagttcaaattctggtactcgatcacaaaggcc 439
Query: 361 ttttgcattgcatttgtgatgactttctttagtgcgtttgatgttcctgtcttctggcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttttgcattgcatttgtgatgactttctttagtgcgtttgatgttcctgtcttctggcca 499
Query: 421 atacttctcttctattgggtggtcctattcacgctcactatgaggagacagatatcccac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atacttctcttctattgggtggtcctattcacgctcactatgaggagacagatatcccac 559
Query: 481 atgatcaaatacaaatatgtaccgttctcatttgggaagcagcgctatactggaaagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgatcaaatacaaatatgtaccgttctcatttgggaagcagcgctatactggaaagaga 619
Query: 541 gcatcagctgaaagcaagagccttccggaggactga 576
||||||||||||||||||||||||||||||||||||
Sbjct: 620 gcatcagctgaaagcaagagccttccggaggactga 655
>gnl|LJGI|TC73458 similar to UniRef100_A7PLG2 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (80%)
Length = 1007
Score = 347 bits (175), Expect = 5e-95
Identities = 351/409 (85%), Gaps = 3/409 (0%)
Strand = Plus / Plus
Query: 151 ctccgtgtctacctggtggagggcttctacatcgtctcctacgctctcggcatctacatc 210
||||| |||||| ||||||| || ||||||||||| ||||||| ||||||||| ||||||
Sbjct: 246 ctccgcgtctacatggtggaaggattctacatcgtttcctacggtctcggcatttacatc 305
Query: 211 ctcaacctcctcatcggtttcctctcccctcaggtcgatcccgaggtttacga---cgac 267
|||||||| || ||||| ||||| |||||||||||||||||||||||| | || ||
Sbjct: 306 ctcaaccttctgatcggcttcctttcccctcaggtcgatcccgaggttcaagattccggt 365
Query: 268 ggccccaccctccctacctccggatccgatgagttccgccctttcgttcgccgtattccc 327
|||||| ||||||| |||||| ||||| ||||| ||||| ||||||||||| | ||
Sbjct: 366 ggcccctccctccccacctccacttccgacgagtttcgccccttcgttcgccgcctcccg 425
Query: 328 gagttcaaattctggtactcgatcacaaaggccttttgcattgcatttgtgatgactttc 387
|||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||||
Sbjct: 426 gagttcaagttctggtactcaatcacgaaggcattttgcattgcatttgtgatgactttc 485
Query: 388 tttagtgcgtttgatgttcctgtcttctggccaatacttctcttctattgggtggtccta 447
|||||||| |||||||||||||||||||||||||| || |||||||| |||||| |||
Sbjct: 486 tttagtgcctttgatgttcctgtcttctggccaattctcctcttctactgggtgaccctc 545
Query: 448 ttcacgctcactatgaggagacagatatcccacatgatcaaatacaaatatgtaccgttc 507
||||| || |||||||||||||| ||| | |||||||||| ||||||||||||||| ||
Sbjct: 546 ttcactcttactatgaggagacaaatagctcacatgatcagatacaaatatgtaccattt 605
Query: 508 tcatttgggaagcagcgctatactggaaagagagcatcagctgaaagca 556
|||||||| ||| ||| ||| ||||||| | |||||||| |||||||
Sbjct: 606 tcatttggaaagatgcggtatgatggaaagcgggcatcagcagaaagca 654
>gnl|LJGI|BP043461 similar to UniRef100_A7PLG2 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 505
Score = 212 bits (107), Expect = 2e-54
Identities = 188/215 (87%)
Strand = Plus / Minus
Query: 342 gtactcgatcacaaaggccttttgcattgcatttgtgatgactttctttagtgcgtttga 401
|||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 505 gtactcaatcacgaaggcattttgcattgcatttgtgatgactttctttagtgcctttga 446
Query: 402 tgttcctgtcttctggccaatacttctcttctattgggtggtcctattcacgctcactat 461
||||||||||||||||||||| || |||||||| |||||| ||| ||||| || |||||
Sbjct: 445 tgttcctgtcttctggccaattctcctcttctactgggtgaccctcttcactcttactat 386
Query: 462 gaggagacagatatcccacatgatcaaatacaaatatgtaccgttctcatttgggaagca 521
||||||||| ||| | |||||||||| ||||||||||||||| || |||||||| |||
Sbjct: 385 gaggagacaaatagctcacatgatcagatacaaatatgtaccattttcatttggaaagat 326
Query: 522 gcgctatactggaaagagagcatcagctgaaagca 556
||| ||| ||||||| | |||||||| |||||||
Sbjct: 325 gcggtatgatggaaagcgggcatcagcagaaagca 291
>gnl|LJGI|FS338455 similar to UniRef100_A7P8Y5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (88%)
Length = 787
Score = 91.7 bits (46), Expect = 5e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 314 ttcgccgtattcccgagttcaaattctggtactcgatcacaaaggccttttgcattgcat 373
||||||| |||| ||||| || |||||||| || |||||||||| || ||||| || |
Sbjct: 587 ttcgccgccttcctgagtttaagttctggtattctttcacaaaggctttctgcatagctt 646
Query: 374 ttgtgatgactttctttagtgcgtttgatgttcctgtcttctggccaata 423
||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 647 ttgtgatgactttcttttctgtatttgatgttcctgtcttctggccaata 696
>gnl|LJGI|TC75451 similar to UniRef100_A7P8Y5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1118
Score = 91.7 bits (46), Expect = 5e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 314 ttcgccgtattcccgagttcaaattctggtactcgatcacaaaggccttttgcattgcat 373
||||||| |||| ||||| || |||||||| || |||||||||| || ||||| || |
Sbjct: 416 ttcgccgccttcctgagtttaagttctggtattctttcacaaaggctttctgcatagctt 475
Query: 374 ttgtgatgactttctttagtgcgtttgatgttcctgtcttctggccaata 423
||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 476 ttgtgatgactttcttttctgtatttgatgttcctgtcttctggccaata 525
>gnl|LJGI|TC63902 similar to UniRef100_A7P8Y5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 736
Score = 91.7 bits (46), Expect = 5e-18
Identities = 94/110 (85%)
Strand = Plus / Plus
Query: 314 ttcgccgtattcccgagttcaaattctggtactcgatcacaaaggccttttgcattgcat 373
||||||| |||| ||||| || |||||||| || |||||||||| || ||||| || |
Sbjct: 461 ttcgccgccttcctgagtttaagttctggtattctttcacaaaggctttctgcatagctt 520
Query: 374 ttgtgatgactttctttagtgcgtttgatgttcctgtcttctggccaata 423
||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 521 ttgtgatgactttcttttctgtatttgatgttcctgtcttctggccaata 570