Miyakogusa Predicted Gene

Lj2g3v1902120.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1902120.1 tr|A9TF35|A9TF35_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_169716,79.37,5e-18,seg,NULL;
coiled-coil,NULL,CUFF.38125.1
         (575 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80382                                                      777   0.0  

>gnl|LJGI|TC80382 
          Length = 1188

 Score =  777 bits (392), Expect = 0.0
 Identities = 392/392 (100%)
 Strand = Plus / Plus

                                                                        
Query: 184  caacagagacttgatgaagagggtgctgcaattgctgaagctgttgctctgcatgtcctg 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778  caacagagacttgatgaagagggtgctgcaattgctgaagctgttgctctgcatgtcctg 837

                                                                        
Query: 244  ctcggtgaagactcggacgagtcgtgtaacgttgtcattaatgaaggtgggtgcaattcg 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838  ctcggtgaagactcggacgagtcgtgtaacgttgtcattaatgaaggtgggtgcaattcg 897

                                                                        
Query: 304  tggaattataatcatggtcttgacttcttcatgggtggaaaaagagcttgctttcctcat 363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898  tggaattataatcatggtcttgacttcttcatgggtggaaaaagagcttgctttcctcat 957

                                                                        
Query: 364  ctagatggcggaacatggtctgtcactgctgaaaatggcaactggtctttctcatctggg 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958  ctagatggcggaacatggtctgtcactgctgaaaatggcaactggtctttctcatctggg 1017

                                                                        
Query: 424  cctttcgaatttgaaaagaatgtgcatgagccactttacgaagatgccggatggggttgt 483
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 cctttcgaatttgaaaagaatgtgcatgagccactttacgaagatgccggatggggttgt 1077

                                                                        
Query: 484  acgggtttatctgctgatctgatagcagcacaagcagcgagatcgctccatattgcagag 543
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1078 acgggtttatctgctgatctgatagcagcacaagcagcgagatcgctccatattgcagag 1137

                                            
Query: 544  gacaccgatgaagataggattctcttctaatt 575
            ||||||||||||||||||||||||||||||||
Sbjct: 1138 gacaccgatgaagataggattctcttctaatt 1169



 Score =  297 bits (150), Expect = 4e-80
 Identities = 153/154 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggatagcatggcatgtaacaaggggcaacaagtgagaaagacgaagaagaagcaggtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 atggatagcatggcatgtaacaaggggcaacaagtgagaaagacgaagaagaagcaggtg 654

                                                                       
Query: 61  aaagatgagttggatcgtctgaaacaggctgaaaagaaaaagaggcgcttggagaaagca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aaagatgagttggatcgtctgaaacaggctgaaaagaaaaagaggcgcttggagaaagca 714

                                             
Query: 121 ctatctacttctgctgccatcatctctgaactgg 154
           ||| ||||||||||||||||||||||||||||||
Sbjct: 715 ctagctacttctgctgccatcatctctgaactgg 748