Miyakogusa Predicted Gene
- Lj2g3v1892030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1892030.1 Non Chatacterized Hit- tr|G7JK05|G7JK05_MEDTR CBS
domain-containing protein, putative OS=Medicago
tr,65.71,7e-19,CBS-domain,NULL; INOSINE-5-MONOPHOSPHATE DEHYDROGENASE
RELATED,NULL; CBS,Cystathionine beta-synthase,CUFF.38035.1
(474 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76047 similar to UniRef100_A7PLE7 Cluster: Chromosome... 924 0.0
gnl|LJGI|TC69120 similar to UniRef100_A7PLE7 Cluster: Chromosome... 924 0.0
gnl|LJGI|TC62695 homologue to emb|AJ235987.1|MLI235987 Mentzelli... 706 0.0
gnl|LJGI|BP035037 similar to UniRef100_A7PLE7 Cluster: Chromosom... 335 1e-91
gnl|LJGI|TC65808 similar to UniRef100_Q92E97 Cluster: Lin0563 pr... 86 2e-16
gnl|LJGI|TC58252 similar to UniRef100_A7PLE7 Cluster: Chromosome... 62 3e-09
>gnl|LJGI|TC76047 similar to UniRef100_A7PLE7 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 848
Score = 924 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Plus
Query: 1 atgacaaagagagaggatttacatgtggtaaagcccacaacaactgtggatgaagctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgacaaagagagaggatttacatgtggtaaagcccacaacaactgtggatgaagctctg 377
Query: 61 gaaatgcttgttgaacatagggtaactggttttcccgtgattgatgataagtggaaccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaaatgcttgttgaacatagggtaactggttttcccgtgattgatgataagtggaaccta 437
Query: 121 gttggtgttgtttcagattacgacttgttagcactggactctatatcaggtaatgggagg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gtttgtgttgtttcagattacgacttgttagcactggactctatatcaggtaatgggagg 497
Query: 181 aaggagagtagcatgtttccagaagttgacagttcttggaaaactttcaatgaggtgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaggagagtagcatgtttccagaagttgacagttcttggaaaactttcaatgaggtgcag 557
Query: 241 aatctgttgagtaagacaaacgggaaggtaatcggtgaattaatgactactgcccctatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aatctgttgagtaagacaaacgggaaggtaatcggtgaattaatgactactgcccctatg 617
Query: 301 gtcgttcgggagaacaccaatcttgaggatgctgccaggttgttgctagaaacaaagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gtcgttcgggagaacaccaatcttgaggatgctgccaggttgttgctagaaacaaagttt 677
Query: 361 agacgccttccagttgtagattttgaaggtagactggttgggattatcaccagaggaaat 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 678 agacgccttccagttgtagattctgaaggtagactggttgggattatcaccagaggaaat 737
Query: 421 gttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatgatag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatgatag 791
>gnl|LJGI|TC69120 similar to UniRef100_A7PLE7 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1048
Score = 924 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Plus
Query: 1 atgacaaagagagaggatttacatgtggtaaagcccacaacaactgtggatgaagctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atgacaaagagagaggatttacatgtggtaaagcccacaacaactgtggatgaagctctg 439
Query: 61 gaaatgcttgttgaacatagggtaactggttttcccgtgattgatgataagtggaaccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaaatgcttgttgaacatagggtaactggttttcccgtgattgatgataagtggaaccta 499
Query: 121 gttggtgttgtttcagattacgacttgttagcactggactctatatcaggtaatgggagg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtttgtgttgtttcagattacgacttgttagcactggactctatatcaggtaatgggagg 559
Query: 181 aaggagagtagcatgtttccagaagttgacagttcttggaaaactttcaatgaggtgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aaggagagtagcatgtttccagaagttgacagttcttggaaaactttcaatgaggtgcag 619
Query: 241 aatctgttgagtaagacaaacgggaaggtaatcggtgaattaatgactactgcccctatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aatctgttgagtaagacaaacgggaaggtaatcggtgaattaatgactactgcccctatg 679
Query: 301 gtcgttcgggagaacaccaatcttgaggatgctgccaggttgttgctagaaacaaagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcgttcgggagaacaccaatcttgaggatgctgccaggttgttgctagaaacaaagttt 739
Query: 361 agacgccttccagttgtagattttgaaggtagactggttgggattatcaccagaggaaat 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 740 agacgccttccagttgtagattctgaaggtagactggttgggattatcaccagaggaaat 799
Query: 421 gttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatgatag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatgatag 853
>gnl|LJGI|TC62695 homologue to emb|AJ235987.1|MLI235987 Mentzellia lindleyi 18S rRNA
gene, partial (5%)
Length = 701
Score = 706 bits (356), Expect = 0.0
Identities = 362/364 (99%)
Strand = Plus / Plus
Query: 111 gtggaacctagttggtgttgtttcagattacgacttgttagcactggactctatatcagg 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtggaacctagttggtgttgtttcagattacgacttgttagcactggactctatatcagg 317
Query: 171 taatgggaggaaggagagtagcatgtttccagaagttgacagttcttggaaaactttcaa 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 taatgggaggaaggagagtagcatgtttccagaagttgacagttcttggaaaactttcaa 377
Query: 231 tgaggtgcagaatctgttgagtaagacaaacgggaaggtaatcggtgaattaatgactac 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgaggtgcagaatctgttgagtaagacaaacgggaaggtaatcggtgaattaatgactac 437
Query: 291 tgcccctatggtcgttcgggagaacaccaatcttgaggatgctgccaggttgttgctaga 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgcccctatggtcgttcgggagaacaccaatcttgaggatgctgccaggttgttgctaga 497
Query: 351 aacaaagtttagacgccttccagttgtagattttgaaggtagactggttgggattatcac 410
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 498 aacaaagtttagacgccttccagttgtagattctggaggtagactggttgggattatcac 557
Query: 411 cagaggaaatgttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatg 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cagaggaaatgttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatg 617
Query: 471 atag 474
||||
Sbjct: 618 atag 621
Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 1 atgacaaagagagaggatttacatgtggtaaagcccacaacaactgtgga 50
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 atgacaaagagagaggatttacatgtggtaaagcccacaacaactgtgga 262
>gnl|LJGI|BP035037 similar to UniRef100_A7PLE7 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 489
Score = 335 bits (169), Expect = 1e-91
Identities = 174/176 (98%)
Strand = Plus / Minus
Query: 299 tggtcgttcgggagaacaccaatcttgaggatgctgccaggttgttgctagaaacaaagt 358
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 489 tggtcgttcgggagaacaccaatcttgaggatgctgncaggttgttgctagaaacaaagt 430
Query: 359 ttagacgccttccagttgtagattttgaaggtagactggttgggattatcaccagaggaa 418
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 429 ttagacgccttccagttgtagattctgaaggtagactggttgggattatcaccagaggaa 370
Query: 419 atgttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatgatag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgttgtaggagccgctcttcaaattaaacgagctatccaaaacaaagcatgatag 314
Score = 61.9 bits (31), Expect = 3e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 441 aattaaacgagctatccaaaacaaagcatgatag 474
|||||||||||||||||||||| |||||||||||
Sbjct: 230 aattaaacgagctatccaaaacnaagcatgatag 197
>gnl|LJGI|TC65808 similar to UniRef100_Q92E97 Cluster: Lin0563 protein; n=1; Listeria
innocua|Rep: Lin0563 protein - Listeria innocua, partial
(5%)
Length = 655
Score = 85.7 bits (43), Expect = 2e-16
Identities = 52/55 (94%)
Strand = Plus / Plus
Query: 169 ggtaatgggaggaaggagagtagcatgtttccagaagttgacagttcttggaaaa 223
||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||
Sbjct: 373 ggtaatgggaggaaggacagtagcatgtttccagaagttgacagtacttgaaaaa 427
>gnl|LJGI|TC58252 similar to UniRef100_A7PLE7 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1236
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 101 ttgatgataagtggaacctagttggtgttgtttcagattacgacttgttagcactggact 160
|||||||| | ||||| || ||||| |||||||||||||| |||||||||||| | || |
Sbjct: 447 ttgatgatgactggaatctggttggagttgtttcagattatgacttgttagcaattgatt 506
Query: 161 ctatatcaggt 171
| |||||||||
Sbjct: 507 ccatatcaggt 517