Miyakogusa Predicted Gene
- Lj2g3v1890900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1890900.1 Non Chatacterized Hit- tr|I1ND50|I1ND50_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57895
PE,62.12,0,HTH_MYB,Myb domain; SANT SWI3, ADA2, N-CoR and TFIIIB''
DNA-bin,SANT/Myb domain; Myb_DNA-binding,SA,CUFF.38017.1
(525 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69475 similar to UniRef100_A7QNL8 Cluster: Chromosome... 198 2e-50
gnl|LJGI|GO019054 similar to UniRef100_A7QNL8 Cluster: Chromosom... 157 8e-38
gnl|LJGI|TC65181 similar to UniRef100_A7QNL8 Cluster: Chromosome... 133 1e-30
>gnl|LJGI|TC69475 similar to UniRef100_A7QNL8 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (79%)
Length = 1444
Score = 198 bits (100), Expect = 2e-50
Identities = 230/272 (84%), Gaps = 6/272 (2%)
Strand = Plus / Plus
Query: 245 atcaggaacgacgaaagggtactccttggactgaggatgaacacaagcagtttcttcttg 304
||||||| ||||||||||||| | ||||||||||||| ||||||| |||||||||||
Sbjct: 666 atcaggagcgacgaaagggtattgcttggactgaggaagaacacagattgtttcttcttg 725
Query: 305 ggttggaaaagtttggaaaaggtgactggagaagcatatcaaggcacttcgtggtgacaa 364
| ||||| |||| |||||||||||||||| |||| ||||||||| |||| ||||||||||
Sbjct: 726 gtttggataagtatggaaaaggtgactggcgaagtatatcaaggaactttgtggtgacaa 785
Query: 365 gaacagccacacaagttgcaagccatgcacaaaaatacttccttcgtttgaattcgactt 424
||||| | |||||||| ||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 786 gaacaccaacacaagtagcaagccatgcccaaaagtacttcattcgtttgaattcgatga 845
Query: 425 cta---ataaaaagcgatccagcatacatgatatcaccattgacaacaatgaaggcactt 481
|| ||| || ||||||||| |||||||||||||||| || ||||||| || || ||
Sbjct: 846 ataaagatagaaggcgatccagtatacatgatatcaccagtgtgaacaatggagacattt 905
Query: 482 cagcagcacctcaaggaccaattactggtcag 513
|||| |||||||||||||| |||||||||
Sbjct: 906 ---cagctcctcaaggaccaataactggtcag 934
Score = 119 bits (60), Expect = 2e-26
Identities = 133/156 (85%), Gaps = 1/156 (0%)
Strand = Plus / Plus
Query: 5 ctgagtggagcagagagcaggagaaagcatttgaaaa-tgccattgcaagttatgctgaa 63
|||||||||||||||||||||| |||||||||||||| |||| | |||| |||| ||||
Sbjct: 353 ctgagtggagcagagagcaggataaagcatttgaaaaatgccttggcaacttatcctgag 412
Query: 64 gatgatccatatcgatgggagaagattgcggctgctgtaccagggaaagcaatcaaagaa 123
|||||| || |||||||||||||||||||||||| |||||| |||||| | | ||||
Sbjct: 413 gatgattcagatcgatgggagaagattgcggctgatgtaccggggaaaactttagaagag 472
Query: 124 gttaaacatcattatctgatcttgcttgatgatgtt 159
|||||||||||||| | | ||| |||||||||||
Sbjct: 473 attaaacatcattatgagcttttggttgatgatgtt 508
>gnl|LJGI|GO019054 similar to UniRef100_A7QNL8 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (48%)
Length = 626
Score = 157 bits (79), Expect = 8e-38
Identities = 188/223 (84%), Gaps = 6/223 (2%)
Strand = Plus / Plus
Query: 294 gtttcttcttgggttggaaaagtttggaaaaggtgactggagaagcatatcaaggcactt 353
|||||||||||| ||||| |||| |||||||||||||||| |||| ||||||||| ||||
Sbjct: 163 gtttcttcttggtttggataagtatggaaaaggtgactggcgaagtatatcaaggaactt 222
Query: 354 cgtggtgacaagaacagccacacaagttgcaagccatgcacaaaaatacttccttcgttt 413
||||||||||||||| | |||||||| ||||||||||| ||||| |||||| |||||||
Sbjct: 223 tgtggtgacaagaacaccaacacaagtagcaagccatgcccaaaagtacttcattcgttt 282
Query: 414 gaattcgacttcta---ataaaaagcgatccagcatacatgatatcaccattgacaacaa 470
|||||||| || ||| || ||||||||| |||||||||||||||| || |||||
Sbjct: 283 gaattcgatgaataaagatagaaggcgatccagtatacatgatatcaccagtgtgaacaa 342
Query: 471 tgaaggcacttcagcagcacctcaaggaccaattactggtcag 513
|| || || || |||| |||||||||||||| |||| ||||
Sbjct: 343 tggagacattt---cagctcctcaaggaccaataactgttcag 382
>gnl|LJGI|TC65181 similar to UniRef100_A7QNL8 Cluster: Chromosome undetermined
scaffold_133, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_133,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (21%)
Length = 764
Score = 133 bits (67), Expect = 1e-30
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 5 ctgagtggagcagagagcaggagaaagcatttgaaaatgccattgcaagttatgctgaag 64
|||||||||||||||||||||| |||||||||||||||||| | |||| |||| |||| |
Sbjct: 445 ctgagtggagcagagagcaggataaagcatttgaaaatgccttggcaacttatcctgagg 504
Query: 65 atgatccatatcgatgggagaagattgcggctgctgtaccagggaaagcaatcaaagaag 124
||||| || |||||||||||||||||||||||| |||||| |||||| | | ||||
Sbjct: 505 atgattcagatcgatgggagaagattgcggctgatgtaccggggaaaactttagaagaga 564
Query: 125 ttaaacatcattatctgatcttgcttgatgatgtt 159
|||||||||||||| | | ||| |||||||||||
Sbjct: 565 ttaaacatcattatgagcttttggttgatgatgtt 599