Miyakogusa Predicted Gene
- Lj2g3v1879770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1879770.1 Non Chatacterized Hit- tr|I1I7U8|I1I7U8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,34.42,4e-18,coiled-coil,NULL; Remorin_C,Remorin, C-terminal;
seg,NULL,CUFF.38005.1
(975 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58191 similar to UniRef100_A7PLA3 Cluster: Chromosome... 1235 0.0
gnl|LJGI|TC79559 similar to UniRef100_A7PLA3 Cluster: Chromosome... 880 0.0
gnl|LJGI|BP069559 similar to UniRef100_A7PLA3 Cluster: Chromosom... 714 0.0
gnl|LJGI|TC70062 similar to UniRef100_A7PLA3 Cluster: Chromosome... 476 e-133
gnl|LJGI|TC69065 similar to UniRef100_Q00M66 Cluster: Remorin; n... 76 5e-13
gnl|LJGI|AV769634 homologue to UniRef100_Q00M66 Cluster: Remorin... 60 3e-08
>gnl|LJGI|TC58191 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1276
Score = 1235 bits (623), Expect = 0.0
Identities = 663/683 (97%)
Strand = Plus / Plus
Query: 98 ttccgctgagacgccaaagtatggttgtgaaaaacttaatgatgagttcacctttttcaa 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttccgctgagacgccaaagtatggttgtgaaaaacttaatgatgagttcacctttttcaa 480
Query: 158 caggagttttggcaccagatgctctttctcttcaccattattatgcagcacatgacactg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caggagttttggcaccagatgctctttctcttcaccattattatgcagcacatgacactg 540
Query: 218 tttttagtcccctttnnnnnnnnnnnnnnnnnnnnactgacaatgagatacaatattcta 277
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 541 tttttagtcccctttatgatgatgatgatgatgatactgacaatgagatacaatattcta 600
Query: 278 gttctgagctcaaccagaatggtgttgctcttccatcagtgtctagtgcacccatgtggt 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttctgagctcaaccagaatggtgttgctcttccatcagtgtctagtgcacccatgtggt 660
Query: 338 cagaattgctttgtgacccttcttcacctaactttcaagatgagaaatgtaatggaacta 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagaattgctttgtgacccttcttcacctaactttcaagatgagaaatgtaatggaacta 720
Query: 398 agaatgaggaaactgaggtatctcctttcttaagacgcgatcaaggtacccaaatgagcc 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agaatgaggaaactgaggtatctcctttcttaagacgcgatcaaggtacccaaatgagcc 780
Query: 458 ttccagaaactgagaatgattcagcacactcgtctgcaaaatcctcccccagtttggcca 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ttccagaaactgagaatgattcagcacactcgtctgcaaaatcctcccccagtttggcca 840
Query: 518 tgaatccaaaaaattgtaattcaagtaagttagaggtcagagatgtgcaagtagacaatc 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgaatccaaaaaattgtaattcaagtaagttagaggtcagagatgtgcaagtagacaatc 900
Query: 578 aagctcctgttaataagtggtctaagcagaaccatctacatgatgaagacttacagagaa 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aagctcctgttaataagtggtctaagcagaaccatctacatgatgaagacttacagagaa 960
Query: 638 gtagtaaagaagctcaagcctcaagtttggatattgcagagtcaacattggacatttcca 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtagtaaagaagctcaagcctcaagtttggatattgcagagtcaacattggacatttcca 1020
Query: 698 agtttcacagagaggaagccaaaatcattgcttgggagagtttgcagaaggcaaaggctg 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 agtttcacagagaggaagccaaaatcattgcttgggagagtttgcagaaggcaaaggctg 1080
Query: 758 aagctgcaatacgaaaactcgag 780
|||||||||||||||||||||||
Sbjct: 1081 aagctgcaatacgaaaactcgag 1103
Score = 194 bits (98), Expect = 7e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 atgatgctgagaggtggatttgcagccctgtttcaagcagctatgctaataaccaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 atgatgctgagaggtggatttgcagccctgtttcaagcagctatgctaataaccaacatc 339
Query: 61 aattaccgcggcggccgaaatcaaaaagcggtccgatt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aattaccgcggcggccgaaatcaaaaagcggtccgatt 377
>gnl|LJGI|TC79559 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 687
Score = 880 bits (444), Expect = 0.0
Identities = 466/472 (98%), Gaps = 1/472 (0%)
Strand = Plus / Plus
Query: 505 cccagtttggccatgaatccaaaaaattgtaattcaagtaagttagaggtcagagatgtg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cccagtttggccatgaatccaaaaaattgtaattcaagtaagttagaggtcagagatgtg 60
Query: 565 caagtagacaatcaagctcctgttaataagtggtctaagcagaaccatctacatgatgaa 624
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 caagtagacaatcaagctcctgttaataagtggtctaagcagaaccatttacatgatgaa 120
Query: 625 gacttacagagaagtagtaaagaagctcaagcctcaagtttggatattgcagagtcaaca 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gacttacagagaagtagtaaagaagctcaagcctcaagtttggatattgcagagtcaaca 180
Query: 685 ttggacatttccaagtttcacagagaggaagccaaaatcattgcttgggagagtttgcag 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggacatttccaagtttcacagagaggaagccaaaatcattgcttgggagagtttgcag 240
Query: 745 aaggcaaaggctgaagctgcaatacgaaaactcgagatgaaattggaaaagaagagatcc 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaggcaaaggctgaagctgcaatacgaaaactcgagatgaaattggaaaagaagagatcc 300
Query: 805 tcatcaatggataagattctaaaaaagttgagaagggctcagatgaaagctgaaaagatg 864
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcatccatggataagattttaaaaaagttgagaagggctcagatgaaagctgaaaagatg 360
Query: 865 agaagcttaacacctgtacaacaaca-gggtcacagggtttgcaagacttggaaggtatt 923
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 361 agaagcttaacccctgtacaacaacacgggtcacagggtttgcaagacttggaaggtatt 420
Query: 924 ttcatttcccaaatggtctcctagcagatgcttcagcagccatgctctgtga 975
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcatttcccaaatggtttcctagcagatgcttcagcagccatgctctgtga 472
>gnl|LJGI|BP069559 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 456
Score = 714 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Minus
Query: 616 catgatgaagacttacagagaagtagtaaagaagctcaagcctcaagtttggatattgca 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 catgatgaagacttacagagaagtagtaaagaagctcaagcctcaagtttggatattgca 397
Query: 676 gagtcaacattggacatttccaagtttcacagagaggaagccaaaatcattgcttgggag 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gagtcaacattggacatttccaagtttcacagagaggaagccaaaatcattgcttgggag 337
Query: 736 agtttgcagaaggcaaaggctgaagctgcaatacgaaaactcgagatgaaattggaaaag 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agtttgcagaaggcaaaggctgaagctgcaatacgaaaactcgagatgaaattggaaaag 277
Query: 796 aagagatcctcatcaatggataagattctaaaaaagttgagaagggctcagatgaaagct 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aagagatcctcatcaatggataagattctaaaaaagttgagaagggctcagatgaaagct 217
Query: 856 gaaaagatgagaagcttaacacctgtacaacaacagggtcacagggtttgcaagacttgg 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gaaaagatgagaagcttaacacctgtacaacaacagggtcacagggtttgcaagacttgg 157
Query: 916 aaggtattttcatttcccaaatggtctcctagcagatgcttcagcagccatgctctgtga 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 aaggtattttcatttcccaaatggtctcctagcagatgcttcagcagccatgctctgtga 97
>gnl|LJGI|TC70062 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 885
Score = 476 bits (240), Expect = e-133
Identities = 280/300 (93%)
Strand = Plus / Plus
Query: 98 ttccgctgagacgccaaagtatggttgtgaaaaacttaatgatgagttcacctttttcaa 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ttccgctgagacgccaaagtatggttgtgaaaaacttaatgatgagttcacctttttcaa 645
Query: 158 caggagttttggcaccagatgctctttctcttcaccattattatgcagcacatgacactg 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 caggagttttggcaccagatgctctttctcttcaccattattatgcagcacatgacactg 705
Query: 218 tttttagtcccctttnnnnnnnnnnnnnnnnnnnnactgacaatgagatacaatattcta 277
||||||||||||||| |||||||||||||||||||||||||
Sbjct: 706 tttttagtcccctttatgatgatgatgatgatgatactgacaatgagatacaatattcta 765
Query: 278 gttctgagctcaaccagaatggtgttgctcttccatcagtgtctagtgcacccatgtggt 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 gttctgagctcaaccagaatggtgttgctcttccatcagtgtctagtgcacccatgtggt 825
Query: 338 cagaattgctttgtgacccttcttcacctaactttcaagatgagaaatgtaatggaacta 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 cagaattgctttgtgacccttcttcacctaactttcaagatgagaaatgtaatggaacta 885
Score = 194 bits (98), Expect = 7e-49
Identities = 98/98 (100%)
Strand = Plus / Plus
Query: 1 atgatgctgagaggtggatttgcagccctgtttcaagcagctatgctaataaccaacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgatgctgagaggtggatttgcagccctgtttcaagcagctatgctaataaccaacatc 504
Query: 61 aattaccgcggcggccgaaatcaaaaagcggtccgatt 98
||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aattaccgcggcggccgaaatcaaaaagcggtccgatt 542
>gnl|LJGI|TC69065 similar to UniRef100_Q00M66 Cluster: Remorin; n=1; Glycine max|Rep:
Remorin - Glycine max (Soybean), partial (31%)
Length = 874
Score = 75.8 bits (38), Expect = 5e-13
Identities = 95/114 (83%)
Strand = Plus / Plus
Query: 709 gaggaagccaaaatcattgcttgggagagtttgcagaaggcaaaggctgaagctgcaata 768
|||||||||||||| | ||| ||||||| |||| |||||||| ||||| || ||||||
Sbjct: 220 gaggaagccaaaataactgcatgggagaacctgcaaaaggcaaaagctgaggcagcaata 279
Query: 769 cgaaaactcgagatgaaattggaaaagaagagatcctcatcaatggataagatt 822
|| ||| | ||||||||||| ||||||||| || | || || ||||||||||||
Sbjct: 280 cggaaattagagatgaaattagaaaagaagcgagcatcctctatggataagatt 333
>gnl|LJGI|AV769634 homologue to UniRef100_Q00M66 Cluster: Remorin; n=1; Glycine
max|Rep: Remorin - Glycine max (Soybean), partial (17%)
Length = 441
Score = 60.0 bits (30), Expect = 3e-08
Identities = 90/110 (81%)
Strand = Plus / Minus
Query: 713 aagccaaaatcattgcttgggagagtttgcagaaggcaaaggctgaagctgcaatacgaa 772
|||||||||||| || ||||||| |||||||||||||| |||| || ||| | || |
Sbjct: 441 aagccaaaatcacagcatgggagaacttgcagaaggcaaaagctgtggcagcagttcgga 382
Query: 773 aactcgagatgaaattggaaaagaagagatcctcatcaatggataagatt 822
|||| |||||||| |||||||||| | || | || || ||||||||||||
Sbjct: 381 aactagagatgaagttggaaaagaggcgagcgtcctctatggataagatt 332