Miyakogusa Predicted Gene
- Lj2g3v1875620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1875620.1 Non Chatacterized Hit- tr|C0HG16|C0HG16_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,44.17,3e-17,Remorin_C,Remorin, C-terminal; FAMILY NOT NAMED,NULL;
seg,NULL; coiled-coil,NULL,CUFF.37989.1
(1287 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP069559 similar to UniRef100_A7PLA3 Cluster: Chromosom... 218 7e-56
gnl|LJGI|TC79559 similar to UniRef100_A7PLA3 Cluster: Chromosome... 210 2e-53
gnl|LJGI|TC58191 similar to UniRef100_A7PLA3 Cluster: Chromosome... 109 4e-23
gnl|LJGI|TC69065 similar to UniRef100_Q00M66 Cluster: Remorin; n... 88 2e-16
gnl|LJGI|TC70062 similar to UniRef100_A7PLA3 Cluster: Chromosome... 72 9e-12
gnl|LJGI|AV769634 homologue to UniRef100_Q00M66 Cluster: Remorin... 64 2e-09
>gnl|LJGI|BP069559 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 456
Score = 218 bits (110), Expect = 7e-56
Identities = 194/222 (87%)
Strand = Plus / Minus
Query: 975 ggatattgaagagtcaaccttagacaattccaagttacagagagaggaggctaaaatcat 1034
|||||||| ||||||||| || |||| ||||||||| || |||||||| || ||||||||
Sbjct: 406 ggatattgcagagtcaacattggacatttccaagtttcacagagaggaagccaaaatcat 347
Query: 1035 tgcctgggagaatttgcagaaagcaaaagccgaagctgcaatacggaaactagagatgaa 1094
||| ||||||| ||||||||| ||||| || |||||||||||||| ||||| ||||||||
Sbjct: 346 tgcttgggagagtttgcagaaggcaaaggctgaagctgcaatacgaaaactcgagatgaa 287
Query: 1095 actggaaaagaagagatcatcatcgatggataagattctaaacaagctgagaagggcaca 1154
| |||||||||||||||| ||||| ||||||||||||||||| ||| |||||||||| ||
Sbjct: 286 attggaaaagaagagatcctcatcaatggataagattctaaaaaagttgagaagggctca 227
Query: 1155 gttgaaagctgaaaacaaaagaagcgtaatgcctgtacaaca 1196
| ||||||||||||| | |||||| ||| |||||||||||
Sbjct: 226 gatgaaagctgaaaagatgagaagcttaacacctgtacaaca 185
>gnl|LJGI|TC79559 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 687
Score = 210 bits (106), Expect = 2e-53
Identities = 193/222 (86%)
Strand = Plus / Plus
Query: 975 ggatattgaagagtcaaccttagacaattccaagttacagagagaggaggctaaaatcat 1034
|||||||| ||||||||| || |||| ||||||||| || |||||||| || ||||||||
Sbjct: 162 ggatattgcagagtcaacattggacatttccaagtttcacagagaggaagccaaaatcat 221
Query: 1035 tgcctgggagaatttgcagaaagcaaaagccgaagctgcaatacggaaactagagatgaa 1094
||| ||||||| ||||||||| ||||| || |||||||||||||| ||||| ||||||||
Sbjct: 222 tgcttgggagagtttgcagaaggcaaaggctgaagctgcaatacgaaaactcgagatgaa 281
Query: 1095 actggaaaagaagagatcatcatcgatggataagattctaaacaagctgagaagggcaca 1154
| |||||||||||||||| ||||| |||||||||||| |||| ||| |||||||||| ||
Sbjct: 282 attggaaaagaagagatcctcatccatggataagattttaaaaaagttgagaagggctca 341
Query: 1155 gttgaaagctgaaaacaaaagaagcgtaatgcctgtacaaca 1196
| ||||||||||||| | |||||| ||| |||||||||||
Sbjct: 342 gatgaaagctgaaaagatgagaagcttaacccctgtacaaca 383
>gnl|LJGI|TC58191 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 1276
Score = 109 bits (55), Expect = 4e-23
Identities = 97/111 (87%)
Strand = Plus / Plus
Query: 975 ggatattgaagagtcaaccttagacaattccaagttacagagagaggaggctaaaatcat 1034
|||||||| ||||||||| || |||| ||||||||| || |||||||| || ||||||||
Sbjct: 989 ggatattgcagagtcaacattggacatttccaagtttcacagagaggaagccaaaatcat 1048
Query: 1035 tgcctgggagaatttgcagaaagcaaaagccgaagctgcaatacggaaact 1085
||| ||||||| ||||||||| ||||| || |||||||||||||| |||||
Sbjct: 1049 tgcttgggagagtttgcagaaggcaaaggctgaagctgcaatacgaaaact 1099
Score = 71.9 bits (36), Expect = 9e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 232 ggaagaacaatgccttctaaatgggatgaagctgagaggtggatttgtagtccagtttca 291
||||||||||| ||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 255 ggaagaacaataccttccaaatgggatgatgctgagaggtggatttgcagccctgtttca 314
>gnl|LJGI|TC69065 similar to UniRef100_Q00M66 Cluster: Remorin; n=1; Glycine max|Rep:
Remorin - Glycine max (Soybean), partial (31%)
Length = 874
Score = 87.7 bits (44), Expect = 2e-16
Identities = 107/128 (83%)
Strand = Plus / Plus
Query: 1018 gaggaggctaaaatcattgcctgggagaatttgcagaaagcaaaagccgaagctgcaata 1077
||||| || ||||| | ||| |||||||| |||| || |||||||| || || ||||||
Sbjct: 220 gaggaagccaaaataactgcatgggagaacctgcaaaaggcaaaagctgaggcagcaata 279
Query: 1078 cggaaactagagatgaaactggaaaagaagagatcatcatcgatggataagattctaaac 1137
|||||| ||||||||||| | ||||||||| || |||| || |||||||||||| | |||
Sbjct: 280 cggaaattagagatgaaattagaaaagaagcgagcatcctctatggataagattatgaac 339
Query: 1138 aagctgag 1145
||||||||
Sbjct: 340 aagctgag 347
>gnl|LJGI|TC70062 similar to UniRef100_A7PLA3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 885
Score = 71.9 bits (36), Expect = 9e-12
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 232 ggaagaacaatgccttctaaatgggatgaagctgagaggtggatttgtagtccagtttca 291
||||||||||| ||||| ||||||||||| ||||||||||||||||| || || ||||||
Sbjct: 420 ggaagaacaataccttccaaatgggatgatgctgagaggtggatttgcagccctgtttca 479
>gnl|LJGI|AV769634 homologue to UniRef100_Q00M66 Cluster: Remorin; n=1; Glycine max|Rep:
Remorin - Glycine max (Soybean), partial (17%)
Length = 441
Score = 63.9 bits (32), Expect = 2e-09
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 1039 tgggagaatttgcagaaagcaaaagccgaagctgcaatacggaaactagagatgaaactg 1098
|||||||| |||||||| |||||||| | || ||| | ||||||||||||||||| ||
Sbjct: 424 tgggagaacttgcagaaggcaaaagctgtggcagcagttcggaaactagagatgaagttg 365
Query: 1099 gaaaagaagagatcatcatcgatggataagattctaaacaagct 1142
||||||| | || | || || |||||||||||| | ||||||||
Sbjct: 364 gaaaagaggcgagcgtcctctatggataagattatgaacaagct 321