Miyakogusa Predicted Gene
- Lj2g3v1873570.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1873570.2 Non Chatacterized Hit- tr|H2R136|H2R136_PANTR
Uncharacterized protein OS=Pan troglodytes
GN=ENSG0000,38.24,2e-18,UNKNOWN PROTEIN,NULL; SPLICING FACTOR
(SUPPRESSOR OF WHITE APRICOT),NULL; coiled-coil,NULL;
DRY_EERY,CUFF.38006.2
(1647 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81405 similar to UniRef100_A7PL99 Cluster: Chromosome... 1015 0.0
gnl|LJGI|TC72337 similar to UniRef100_A8MS51 Cluster: Uncharacte... 771 0.0
gnl|LJGI|TC70784 similar to UniRef100_A8MS51 Cluster: Uncharacte... 704 0.0
>gnl|LJGI|TC81405 similar to UniRef100_A7PL99 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 786
Score = 1015 bits (512), Expect = 0.0
Identities = 526/530 (99%), Gaps = 3/530 (0%)
Strand = Plus / Plus
Query: 1118 ggtcatcatctggttgcatacttgaggcattgcatgtcgatcctgcttctggtgtatcta 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggtcatcatctggttgcatacttgaggcattgcatgtcgatcctgcttctggtgtatcta 235
Query: 1178 ttgataaggataagggcactaaagtatggaagccatcagtgagcacttcatcagcattag 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttgataaggataagggcactaaagtatggaagccatcagtgagcacttcatcagcattag 295
Query: 1238 caaaattgaaggcaagtggttctggagggcccttgaagcctctacaaggggagaagaaag 1297
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 296 caaaattgaaggcaagtggttctggagggcccttgaaacctctacaaggggagaagaaag 355
Query: 1298 aaactcctcaagaaagactcaaaaggatcatgaacaggcaactaaccaaacaaattaaga 1357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaactcctcaagaaagactcaaaaggatcatgaacaggcaactaaccaaacaaattaaga 415
Query: 1358 aggatactgcggcagaactggccaagaaaaaggaacaggagaagcagagacaggaaaagc 1417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aggatactgcggcagaactggccaagaaaaaggaacaggagaagcagagacaggaaaagc 475
Query: 1418 tcgctgaatctaatcgattgagtcggtatagacaccgcagcaggagtaacagccgttccc 1477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tcgctgaatctaatcgattgagtcggtatagacaccgcagcaggagtaacagccgttccc 535
Query: 1478 ctccaagaagatacagacgtagtagaagtccaagtagaagcaggagttccagaagacatt 1537
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ctcc---aagatacagacgtagtagaagtccaagtagaagcaggagttccagaagacatt 592
Query: 1538 attcttcttctcgttctggttccccgtccccttcacgaactcattcccggtctcgctccc 1597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 attcttcttctcgttctggttccccgtccccttcacgaactcattcccggtctcgctccc 652
Query: 1598 ggtctcgttctcgatccccttattcccgttctcccaggaaaagaaaccgt 1647
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggtctcgttctcgatccccttattcccgttctcccaggaaaagaaaccgt 702
>gnl|LJGI|TC72337 similar to UniRef100_A8MS51 Cluster: Uncharacterized protein
At4g36980.1; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At4g36980.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 673
Score = 771 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Plus
Query: 1255 ggttctggagggcccttgaagcctctacaaggggagaagaaagaaactcctcaagaaaga 1314
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggttctggagggcccttgaaacctctacaaggggagaagaaagaaactcctcaagaaaga 62
Query: 1315 ctcaaaaggatcatgaacaggcaactaaccaaacaaattaagaaggatactgcggcagaa 1374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ctcaaaaggatcatgaacaggcaactaaccaaacaaattaagaaggatactgcggcagaa 122
Query: 1375 ctggccaagaaaaaggaacaggagaagcagagacaggaaaagctcgctgaatctaatcga 1434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctggccaagaaaaaggaacaggagaagcagagacaggaaaagctcgctgaatctaatcga 182
Query: 1435 ttgagtcggtatagacaccgcagcaggagtaacagccgttcccctccaagaagatacaga 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttgagtcggtatagacaccgcagcaggagtaacagccgttcccctccaagaagatacaga 242
Query: 1495 cgtagtagaagtccaagtagaagcaggagttccagaagacattattcttcttctcgttct 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 cgtagtagaagtccaagtagaagcaggagttccagaagacattattcttcttctcgttct 302
Query: 1555 ggttccccgtccccttcacgaactcattcccggtctcgctcccggtctcgttctcgatcc 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggttccccgtccccttcacgaactcattcccggtctcgctcccggtctcgttctcgatcc 362
Query: 1615 ccttattcccgttctcccaggaaaagaaaccgt 1647
|||||||||||||||||||||||||||||||||
Sbjct: 363 ccttattcccgttctcccaggaaaagaaaccgt 395
>gnl|LJGI|TC70784 similar to UniRef100_A8MS51 Cluster: Uncharacterized protein
At4g36980.1; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At4g36980.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (61%)
Length = 1281
Score = 704 bits (355), Expect = 0.0
Identities = 355/355 (100%)
Strand = Plus / Plus
Query: 1293 gaaagaaactcctcaagaaagactcaaaaggatcatgaacaggcaactaaccaaacaaat 1352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 gaaagaaactcctcaagaaagactcaaaaggatcatgaacaggcaactaaccaaacaaat 973
Query: 1353 taagaaggatactgcggcagaactggccaagaaaaaggaacaggagaagcagagacagga 1412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 taagaaggatactgcggcagaactggccaagaaaaaggaacaggagaagcagagacagga 1033
Query: 1413 aaagctcgctgaatctaatcgattgagtcggtatagacaccgcagcaggagtaacagccg 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 aaagctcgctgaatctaatcgattgagtcggtatagacaccgcagcaggagtaacagccg 1093
Query: 1473 ttcccctccaagaagatacagacgtagtagaagtccaagtagaagcaggagttccagaag 1532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 ttcccctccaagaagatacagacgtagtagaagtccaagtagaagcaggagttccagaag 1153
Query: 1533 acattattcttcttctcgttctggttccccgtccccttcacgaactcattcccggtctcg 1592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1154 acattattcttcttctcgttctggttccccgtccccttcacgaactcattcccggtctcg 1213
Query: 1593 ctcccggtctcgttctcgatccccttattcccgttctcccaggaaaagaaaccgt 1647
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1214 ctcccggtctcgttctcgatccccttattcccgttctcccaggaaaagaaaccgt 1268
Score = 585 bits (295), Expect = e-166
Identities = 295/295 (100%)
Strand = Plus / Plus
Query: 1 atgtggcacgaggcgaggaggtcggagaagaaggtccacgacatgatggacgcggctcga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atgtggcacgaggcgaggaggtcggagaagaaggtccacgacatgatggacgcggctcga 199
Query: 61 aagcgagcacagagacgagccgtttaccttgccaagaggcgcggcgatcctcaacaatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 aagcgagcacagagacgagccgtttaccttgccaagaggcgcggcgatcctcaacaatcc 259
Query: 121 attcagctcgttggcttccgttcccgaacctatcgagacgacgcactttaccaagctacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attcagctcgttggcttccgttcccgaacctatcgagacgacgcactttaccaagctacc 319
Query: 181 caggatcagcagggcctgataccttggaacgggaaacaggatatattgattgacagattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caggatcagcagggcctgataccttggaacgggaaacaggatatattgattgacagattt 379
Query: 241 gatggccgtgctctacttgatttcattcgggatagtagtcataggcgggtccagg 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gatggccgtgctctacttgatttcattcgggatagtagtcataggcgggtccagg 434
Score = 442 bits (223), Expect = e-123
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 327 gtttgttaattttgagcgttatcgggatttaataaagcatcggcgtagaggatttactga 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gtttgttaattttgagcgttatcgggatttaataaagcatcggcgtagaggatttactga 525
Query: 387 tgaagaggctttgcaacatgtaaatcaagagatggaggccaagtctgctcttccatttat 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tgaagaggctttgcaacatgtaaatcaagagatggaggccaagtctgctcttccatttat 585
Query: 447 gtcagacagatctaatttgccacagcctgctgcaaacaaaggatcctattcacaggttgg 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gtcagacagatctaatttgccacagcctgctgcaaacaaaggatcctattcacaggttgg 645
Query: 507 gttttcttatggtgggaatggaaaagaagaatcccagatttca 549
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gttttcttatggtgggaatggaaaagaagaatcccagatttca 688
Score = 343 bits (173), Expect = 2e-93
Identities = 173/173 (100%)
Strand = Plus / Plus
Query: 607 tttaacagtgatgatagtaatgatgaaggaatggagataattgcaaaagaatttggggtt 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tttaacagtgatgatagtaatgatgaaggaatggagataattgcaaaagaatttggggtt 805
Query: 667 aagagatacggttggcttgtttacatggataagaaagctaaggaagaagaaaaaaggcaa 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 aagagatacggttggcttgtttacatggataagaaagctaaggaagaagaaaaaaggcaa 865
Query: 727 aaagagatgatcaaaggtgaccctgcaattagaaagctgagtcgtaaggaaag 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 aaagagatgatcaaaggtgaccctgcaattagaaagctgagtcgtaaggaaag 918