Miyakogusa Predicted Gene
- Lj2g3v1834010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1834010.1 Non Chatacterized Hit- tr|I1J946|I1J946_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.49186 PE,80.77,0,no
description,Tubulin/FtsZ, GTPase domain; coiled-coil,NULL; seg,NULL;
TUBULIN-RELATED PROTEIN,NULL,CUFF.37921.1
(1716 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60421 weakly similar to UniRef100_A7QYF0 Cluster: Chr... 1053 0.0
gnl|LJGI|TC59514 similar to UniRef100_O23167 Cluster: Tubulin-li... 791 0.0
gnl|LJGI|CB828199 weakly similar to UniRef100_A7QYF0 Cluster: Ch... 474 e-133
>gnl|LJGI|TC60421 weakly similar to UniRef100_A7QYF0 Cluster: Chromosome undetermined
scaffold_245, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_245, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(30%)
Length = 776
Score = 1053 bits (531), Expect = 0.0
Identities = 542/545 (99%), Gaps = 3/545 (0%)
Strand = Plus / Plus
Query: 1172 tagggaacttgcatccattgaccccacagatagcagaggatgttgaggacatgcaggcaa 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagggaacttgcatccattgaccccacagatagcagaggatgttgaggacatgcaggcaa 60
Query: 1232 ttgagcacatagcagtccatggagcttttgcatcagaaggtcaccgtgcttcagtctgca 1291
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 61 ttgagcacatagcagtccatggagcttttgcatcag---gtcaccgtgcttcagtctgca 117
Query: 1292 aggtaaaggatacagtagatgctgcttttcaacgtgccaatacaaggccaatgttctgcc 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 aggtaaaggatacagtagatgctgcttttcaacgtgccaatacaaggccaatgttctgcc 177
Query: 1352 atctagcagtagctccctgtcccttgcctattcccctgcctttcccatcaatctttgcaa 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atctagcagtagctccctgtcccttgcctattcccctgcctttcccatcaatctttgcaa 237
Query: 1412 accaagttggccggcatggcgaattgataggcggtcaaatgtctagtacttcatcaaaag 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 accaagttggccggcatggcgaattgataggcggtcaaatgtctagtacttcatcaaaag 297
Query: 1472 gatcccttgacatccattccattcccatggctgcccgattgcgttccagcagtgctgtct 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gatcccttgacatccattccattcccatggctgcccgattgcgttccagcagtgctgtct 357
Query: 1532 taccactgctcgagagtaaattgcgaaatctgaatcggttcggaactgcacgaggagcat 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 taccactgctcgagagtaaattgcgaaatctgaatcggttcggaactgcacgaggagcat 417
Query: 1592 ctggggcagagttacttagaagctggggctttggaaaggaagaattggaggaaatgggag 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ctggggcagagttacttagaagctggggctttggaaaggaagaattggaggaaatgggag 477
Query: 1652 agatgttgtctaaaatggttgcggctttgagtcctcctcagttctcttccgattcagatt 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 agatgttgtctaaaatggttgcggctttgagtcctcctcagttctcttccgattcagatt 537
Query: 1712 agact 1716
|||||
Sbjct: 538 agact 542
>gnl|LJGI|TC59514 similar to UniRef100_O23167 Cluster: Tubulin-like protein; n=2;
Arabidopsis thaliana|Rep: Tubulin-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (25%)
Length = 751
Score = 791 bits (399), Expect = 0.0
Identities = 515/554 (92%), Gaps = 6/554 (1%)
Strand = Plus / Plus
Query: 1 atgaaagaaatagtaactctacaaattggtgattttgccaacttcattggctctcacttc 60
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 204 atgaaagaaatagtaactctccaaattggtgattttgccaatttcattggctctcacttc 263
Query: 61 tggaactttcaggatgagttgcttggattagctggggacactcatggtgattcagttttc 120
||||||||||||||||||||||||||||| ||||||||| || ||| ||||||||| |||
Sbjct: 264 tggaactttcaggatgagttgcttggattggctggggaccctaatgctgattcagtcttc 323
Query: 121 aacagtcaggatcttaacatggacgtgctttatcgtactggtgagacacagggcatccat 180
|| |||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||
Sbjct: 324 aagagtccggatcttaacatggatgtgctttatcgtagtggtgagacacagggcatcaat 383
Query: 181 acttatactcctcgcctagtttccataaacttgagaggatcccttggatctatgagttca 240
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 384 acatatactcctcgcctagtttcaataaacttgagaggatcccttggatctatgagctca 443
Query: 241 tgtggtacattgtataaggaggttgctcccacaacatcagatgttgtgacctggacaggt 300
||||||| ||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 444 cgtggtacgttgtataaggaggtttctcccacaacatg------tgtgacctggacaggt 497
Query: 301 agagtttccacccaagcctctcagtctcaccaaagaaatttatttctacaaagacttaat 360
|||||||||||| || |||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 498 agagtttccaccgaatcctctcagactcacaaaagaaatttatttctacaaagacttaat 557
Query: 361 gaagaagaggaaaatatgaatttggcaaatgagactagcagcacaaacaatggttctcag 420
||||||||||||||||||| |||||||||||||| ||| | ||| ||||||||||||||
Sbjct: 558 gaagaagaggaaaatatgagtttggcaaatgagattagtggtacagacaatggttctcag 617
Query: 421 agtgagtatcaggataaggatataattcaatgtctagaaaatggcgttaagttttggact 480
||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||
Sbjct: 618 agtgagtatcaggataatgatatagttgaatgtctagaaaatggtgttaagttttggact 677
Query: 481 gactactcaaaagtacattatcacccccaaagtttacatgaattaaatggaatttggacg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gactactcaaaagtacattatcacccccaaagtttacatgaattaaatggaatttggacg 737
Query: 541 gatgctgaggaatt 554
||||||||||||||
Sbjct: 738 gatgctgaggaatt 751
>gnl|LJGI|CB828199 weakly similar to UniRef100_A7QYF0 Cluster: Chromosome undetermined
scaffold_245, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_245, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(24%)
Length = 511
Score = 474 bits (239), Expect = e-133
Identities = 290/307 (94%)
Strand = Plus / Plus
Query: 801 gaagcgtacaatctcagctgagcttcatgatgctgtatcgttttcaagactatcatcctt 860
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagcgtacaatctcagcggagcttcatgatgctgtatcgttttcaagactatcatcctt 60
Query: 861 ctgtaaacttattgtacctgttggtctgcccaccttaagcaaaagtaaagcttctaagtt 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgtaaacttattgtacctgttggtctgcccaccttaagcaaaagtaaagcttctaagtt 120
Query: 921 cctccacattgaagatgagaagcattaccattcaagtgcagtttatgctgctgccctaca 980
|||||||||||| |||||| |||||| |||||||||||||||||||||||| ||||||||
Sbjct: 121 cctccacattgatgatgagcagcatttccattcaagtgcagtttatgctgcagccctaca 180
Query: 981 ctctattagtcttcctttccgaatggcaccggttgggcctgctacatatgcatgctcggt 1040
||| |||||||||||||||||||||| ||| || |||||||||||| |||||| |||||
Sbjct: 181 ctccattagtcttcctttccgaatggtaccagtagggcctgctacagatgcatattcggt 240
Query: 1041 ttatggggctgtaaattttcatgaagtcatacaaatgttatcagggcaaggaaggcagaa 1100
|| ||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 ttctggagctgtggattttcatgaagtcatacaaatgttatcagggcacggaaggcagaa 300
Query: 1101 tatggtg 1107
|||||||
Sbjct: 301 tatggtg 307
Score = 198 bits (100), Expect = 8e-50
Identities = 112/116 (96%)
Strand = Plus / Plus
Query: 1152 acagaatgaattgtctttgatagggaacttgcatccattgaccccacagatagcagagga 1211
||||||||||| ||||||||||| ||| |||||||||||||||||||||| |||||||||
Sbjct: 311 acagaatgaatcgtctttgatagcgaatttgcatccattgaccccacagacagcagagga 370
Query: 1212 tgttgaggacatgcaggcaattgagcacatagcagtccatggagcttttgcatcag 1267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgttgaggacatgcaggcaattgagcacatagcagtccatggagcttttgcatcag 426