Miyakogusa Predicted Gene
- Lj2g3v1830940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1830940.1 tr|G7K838|G7K838_MEDTR Cc-nbs-lrr resistance
protein OS=Medicago truncatula GN=MTR_5g018060 PE=4
SV=,74.49,0,NB-ARC,NB-ARC; RPW8,Powdery mildew resistance protein,
RPW8 domain; LRR_1,Leucine-rich repeat; seg,N,CUFF.37912.1
(2496 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS320881 932 0.0
gnl|LJGI|AV425544 similar to UniRef100_A7R3R8 Cluster: Chromosom... 842 0.0
gnl|LJGI|FS358328 137 4e-31
gnl|LJGI|FS361829 similar to UniRef100_A7R558 Cluster: Chromosom... 123 6e-27
gnl|LJGI|TC66893 weakly similar to UniRef100_Q6YIA0 Cluster: Dis... 70 7e-11
gnl|LJGI|TC70156 similar to UniRef100_A7R3R8 Cluster: Chromosome... 66 1e-09
gnl|LJGI|TC72152 similar to UniRef100_Q6YIA0 Cluster: Disease re... 56 1e-06
>gnl|LJGI|FS320881
Length = 594
Score = 932 bits (470), Expect = 0.0
Identities = 470/470 (100%)
Strand = Plus / Plus
Query: 1 atggcggatctcttcaccggagccttagccggagcggtgatgggagaaatggtgaaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atggcggatctcttcaccggagccttagccggagcggtgatgggagaaatggtgaaacgc 184
Query: 61 gctctccaaaccatagaaaacggtcgaaaattcggacccactcttgaaaccaacacacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gctctccaaaccatagaaaacggtcgaaaattcggacccactcttgaaaccaacacacaa 244
Query: 121 accctaaccgctctggctccgttggtggaagagatgatgaggtacaacgaggagctagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 accctaaccgctctggctccgttggtggaagagatgatgaggtacaacgaggagctagat 304
Query: 181 cgtcccagagaagaaatcgagcctcttctgagtcacattcgcgaaggtgaagagctcgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cgtcccagagaagaaatcgagcctcttctgagtcacattcgcgaaggtgaagagctcgtg 364
Query: 241 cgccacagcaagaagcttagtctatggcggtttttctcgctctccagttaccagagcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cgccacagcaagaagcttagtctatggcggtttttctcgctctccagttaccagagcaag 424
Query: 301 cttcagcgcagtgacgagaagctgaagaggcacttgtctgttaacacgcaagtggagagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cttcagcgcagtgacgagaagctgaagaggcacttgtctgttaacacgcaagtggagagt 484
Query: 361 aagagggatttgatggagatcttgttgaaggttaaagaaattcttgagattctggagagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aagagggatttgatggagatcttgttgaaggttaaagaaattcttgagattctggagagg 544
Query: 421 aaggagggtttgggtgggaagtgtcagattaggggtttgagtggggctcc 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaggagggtttgggtgggaagtgtcagattaggggtttgagtggggctcc 594
>gnl|LJGI|AV425544 similar to UniRef100_A7R3R8 Cluster: Chromosome undetermined
scaffold_560, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_560, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 425
Score = 842 bits (425), Expect = 0.0
Identities = 425/425 (100%)
Strand = Plus / Plus
Query: 1213 ttcaatatcaacgagaaggagtgcttcatggatctagggctatttcctgaagaccaaagg 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcaatatcaacgagaaggagtgcttcatggatctagggctatttcctgaagaccaaagg 60
Query: 1273 atccctgttactgcccttattgatatgtgggcagaactctataacctagatgaagatggt 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atccctgttactgcccttattgatatgtgggcagaactctataacctagatgaagatggt 120
Query: 1333 aggaatgcaatgaccattgtacttgatttaacctccaggaatttgattaatttcatagtt 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaatgcaatgaccattgtacttgatttaacctccaggaatttgattaatttcatagtt 180
Query: 1393 acaaggaaagttgcaagtgacgcaggcgtgtgctacaataaccactttgtcatgctgcat 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaaggaaagttgcaagtgacgcaggcgtgtgctacaataaccactttgtcatgctgcat 240
Query: 1453 gatctcctcagggagctggcaatccaccaaagtaaaggggagccatttgaacagagaaaa 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatctcctcagggagctggcaatccaccaaagtaaaggggagccatttgaacagagaaaa 300
Query: 1513 agactgattatcgacttaaatggagataatcgtcctgaatggtgggtaggacagaatcaa 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agactgattatcgacttaaatggagataatcgtcctgaatggtgggtaggacagaatcaa 360
Query: 1573 caaggattcattggccgtttgttttcattcttgccaagaatgttggtgaaacagaaacag 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 caaggattcattggccgtttgttttcattcttgccaagaatgttggtgaaacagaaacag 420
Query: 1633 cttag 1637
|||||
Sbjct: 421 cttag 425
>gnl|LJGI|FS358328
Length = 248
Score = 137 bits (69), Expect = 4e-31
Identities = 69/69 (100%)
Strand = Plus / Minus
Query: 2428 aatttgaagatagagatgcctgcagtagatgtcaacttgaactggctccatggagttcgt 2487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aatttgaagatagagatgcctgcagtagatgtcaacttgaactggctccatggagttcgt 189
Query: 2488 tcgtgagac 2496
|||||||||
Sbjct: 188 tcgtgagac 180
>gnl|LJGI|FS361829 similar to UniRef100_A7R558 Cluster: Chromosome undetermined
scaffold_875, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_875, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(10%)
Length = 677
Score = 123 bits (62), Expect = 6e-27
Identities = 146/174 (83%)
Strand = Plus / Minus
Query: 2010 agtggagttgagcattgactattgcagtgatttggtgaaattgcctgatgatctctgtaa 2069
||||||| ||| |||||||||||||| |||||||||| | |||||| ||| || |||||
Sbjct: 677 agtggagatgaacattgactattgcaatgatttggtggagttgcctcctgagctatgtaa 618
Query: 2070 tattaccccattgaagaagctcagtatcactaactgccacaagctaagtgcactgccaca 2129
||| || | ||||||||||| || || || || || |||||||| |||||| || ||
Sbjct: 617 aatttccaccttgaagaagcttagcattaccaattgtcacaagctttctgcactacccca 558
Query: 2130 agaaattgcaaagctggagaatttggaagtgctaaggctttgttcctgctctga 2183
|||||||| |||||| |||||||||||| ||||||||||| |||||||||||||
Sbjct: 557 agaaattggaaagcttgagaatttggaactgctaaggcttagttcctgctctga 504
>gnl|LJGI|TC66893 weakly similar to UniRef100_Q6YIA0 Cluster: Disease resistance
protein-like protein MsR1; n=1; Medicago sativa|Rep:
Disease resistance protein-like protein MsR1 - Medicago
sativa (Alfalfa), partial (37%)
Length = 830
Score = 69.9 bits (35), Expect = 7e-11
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 1228 aaggagtgcttcatggatctagggctatttcctgaagaccaaaggatccctgttactgcc 1287
||||||||||||||||| ||| ||||||||||||||||||| || |||| ||||||
Sbjct: 130 aaggagtgcttcatggacttagcattatttcctgaagaccaaagaattcctgctactgct 189
Query: 1288 cttattgatatgtgggcag 1306
|| |||||||| |||||||
Sbjct: 190 ctcattgatatctgggcag 208
Score = 54.0 bits (27), Expect = 4e-06
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 1645 gcccgcatattgtctatatcaactgatgaaa 1675
||||||| |||||||||||||||||||||||
Sbjct: 541 gcccgcacattgtctatatcaactgatgaaa 571
>gnl|LJGI|TC70156 similar to UniRef100_A7R3R8 Cluster: Chromosome undetermined
scaffold_560, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_560, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(16%)
Length = 1961
Score = 65.9 bits (33), Expect = 1e-09
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 1255 tttcctgaagaccaaaggatccctgttactgcccttattgatatgtgggcaga 1307
||||||||||| ||||||||||||| | |||||||| | ||||||||||||||
Sbjct: 517 tttcctgaagatcaaaggatccctgctgctgcccttgtggatatgtgggcaga 569
>gnl|LJGI|TC72152 similar to UniRef100_Q6YIA0 Cluster: Disease resistance protein-like
protein MsR1; n=1; Medicago sativa|Rep: Disease
resistance protein-like protein MsR1 - Medicago sativa
(Alfalfa), partial (25%)
Length = 1215
Score = 56.0 bits (28), Expect = 1e-06
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 2083 aagaagctcagtatcactaactgccacaagctaagtgcactgccacaagaaattgcaaag 2142
||||||||| || | ||||| ||||||||||| || ||||| |||||||||| ||||
Sbjct: 405 aagaagctcggtgttactaattgccacaagctttctgggctgccccaagaaattggaaag 464
Query: 2143 ctggagaatttggaagtgctaaggctttgttcctgctctgattt 2186
|||||||||||||| | || ||||| ||||||| |||||||
Sbjct: 465 ttggagaatttggaactcctgaggctgagttcctgtactgattt 508