Miyakogusa Predicted Gene
- Lj2g3v1828890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1828890.1 Non Chatacterized Hit- tr|D8U1A0|D8U1A0_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,28.34,3e-16,UNCHARACTERIZED,NULL; seg,NULL;
coiled-coil,NULL,CUFF.37907.1
(1461 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67659 similar to UniRef100_A7R6Z0 Cluster: Chromosome... 1614 0.0
gnl|LJGI|TC70460 similar to UniRef100_A7R450 Cluster: Chromosome... 886 0.0
>gnl|LJGI|TC67659 similar to UniRef100_A7R6Z0 Cluster: Chromosome undetermined
scaffold_1496, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1496,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (64%)
Length = 1365
Score = 1614 bits (814), Expect = 0.0
Identities = 817/818 (99%)
Strand = Plus / Plus
Query: 644 aaccatctccctttttgcagcagacagttttaagatttgagaagtatcttggggaatgcc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaccatctccctttttgcagcagacagttttaagatttgagaagtatcttggggaatgcc 60
Query: 704 atcagtgggttgaagagttggagcaattgctgctcttagattctgagagaaacacgtcca 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcagtgggttgaagagttggagcaattgctgctcttagattctgagagaaacacgtcca 120
Query: 764 gtaatggatcctcattattgcagtctcttcccaaagtcatgacaaatgtgcatgactttt 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtaatggatcctcattattgcagtctcttcccaaagtcatgacaaatgtgcatgactttt 180
Query: 824 ttgttcatgtggcttcaaaggtcgagggcattcaccagtacattgaatctatgaaatcag 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgttcatgtggcttcaaaggtcgagggcattcaccagtacattgaatctatgaaatcag 240
Query: 884 cataccttgctgatcagcgccgccggggagaggtcaatgatccatttcttgaagctgatc 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cataccttgctgatcagcgccgccggggagaggtcaatgatccatttcttgaagctgatc 300
Query: 944 gtcgagaaactgcaagacaagaagctgcctcgaaaagagtccatccaacgttgcatttgc 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcgagaaactgcaagacaagaagctgcctcgaaaagagtccatccaacgttgcatttgc 360
Query: 1004 ctgcaaattcacaaccctctactcaagttgctgggttgttttctagttcaggaacgcaag 1063
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 361 ctgcaaattcacaaccctctactcaagttgctgggttgttttctagttcaggaatgcaag 420
Query: 1064 ggttattgaatgccccacagacatctgcagcaccttcatcttcatcatcaggaagtggtt 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggttattgaatgccccacagacatctgcagcaccttcatcttcatcatcaggaagtggtt 480
Query: 1124 tctctctttttaacacaacatcttcagctccatcgtcttctatgccatcttctttgtttg 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctctctttttaacacaacatcttcagctccatcgtcttctatgccatcttctttgtttg 540
Query: 1184 caacaccaagtactcctgctcctgggtcctcttggtttgcatcctcaagtactactcctc 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caacaccaagtactcctgctcctgggtcctcttggtttgcatcctcaagtactactcctc 600
Query: 1244 aatcctcactttttggttctgcatcctcatcctttctgggttcggcatcaaccccctctc 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aatcctcactttttggttctgcatcctcatcctttctgggttcggcatcaaccccctctc 660
Query: 1304 tcttcggtaatactgcacctttgcttaatacaccgccagctacaagttccttcttctcaa 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcttcggtaatactgcacctttgcttaatacaccgccagctacaagttccttcttctcaa 720
Query: 1364 atccatttccttcaggtgctgcaacaggatcgggggcaagctttgggggacagaaaaatc 1423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atccatttccttcaggtgctgcaacaggatcgggggcaagctttgggggacagaaaaatc 780
Query: 1424 cacggccaaaagggagagttagtactcggcgctagtaa 1461
||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cacggccaaaagggagagttagtactcggcgctagtaa 818
>gnl|LJGI|TC70460 similar to UniRef100_A7R450 Cluster: Chromosome undetermined
scaffold_618, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_618,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (46%)
Length = 720
Score = 886 bits (447), Expect = 0.0
Identities = 462/467 (98%)
Strand = Plus / Plus
Query: 162 tcagttattcttgttcacgaacgatagaactctggccagttacggcaccaattggtcgga 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcagttattcttgttcacgaacgatagaactctggccagttacggcaccaattggtcgga 313
Query: 222 tctacatcccgattctcagaagattcttcttcagatcgaggagcggatattggagtatag 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tctacatcccgattctcagaagattcttcttcagatcgaggagcggatattggagtatag 373
Query: 282 ggatgaaggccagaggctagatcagtttagtcttctttacgattcttcagtttccaatga 341
||||||| ||||||| |||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 374 ggatgaaagccagagactagatcagtgtagtcgtctttacgattcttcagtttccaatga 433
Query: 342 tgggtttgaagttgatgcatgccacattgttcaggaacttggtggaattagcactgctat 401
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tggatttgaagttgatgcatgccacattgttcaggaacttggtggaattagcactgctat 493
Query: 402 ggaacggcagaaagctttgctgcaggaactgatgtcagttgttaaggatatgttacgcaa 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggaacggcagaaagctttgctgcaggaactgatgtcagttgttaaggatatgttacgcaa 553
Query: 462 cacagaggttgctgttcgttcctttatgatgctacgtccaaggtttcatcccagtggggg 521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cacagaggttgctgttcgttcctttatgatgctacgtccaaggtttcatcccagtggggg 613
Query: 522 ttcatcaagtgccactgccccatcacaggctcctggagtaactacaacacctagttcaag 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 ttcatcaagtgccactgccccatcacaggctcctggagtaactacaacacctagttcaag 673
Query: 582 cagccaaccaacaagtacatctatggtgcctgtttttgatttctaca 628
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 cagccaaccaacaagtacatctatggtgcctgtttttgatttctaca 720
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 atgtcgttttcgttgttctccactcct 27
|||||||||||||||||||||||||||
Sbjct: 93 atgtcgttttcgttgttctccactcct 119