Miyakogusa Predicted Gene

Lj2g3v1828480.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1828480.2 Non Chatacterized Hit- tr|I3SG84|I3SG84_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.22,0,Ribosomal_S8e,Ribosomal protein S8e/ribosomal biogenesis
NSA2; SUBFAMILY NOT NAMED,NULL; FAMILY NOT ,CUFF.37867.2
         (390 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC59973 similar to UniRef100_A7QHR7 Cluster: Chromosome...   741   0.0  
gnl|LJGI|TC59627 similar to UniRef100_A7QHR7 Cluster: Chromosome...   557   e-158
gnl|LJGI|BP059252                                                     107   5e-23

>gnl|LJGI|TC59973 similar to UniRef100_A7QHR7 Cluster: Chromosome chr8 scaffold_99,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_99, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (92%)
          Length = 1087

 Score =  741 bits (374), Expect = 0.0
 Identities = 386/390 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttcaaagtggtccgcactggtaaaagaaagaccaagcaatggaagagaatggttacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgttcaaagtggtccgcactggtaaaagaaagaccaagcaatggaagagaatggttacc 499

                                                                       
Query: 61  aaagctacatttgttgggcctggttttactagaaaacctccaaagtatgagcggttcatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaagctacatttgttgggcctggttttactagaaaacctccaaagtatgagcggttcatt 559

                                                                       
Query: 121 cgtcctactggactgcgattcaccaaagctcatgtcactcatccagaacttaaatgcaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cgtcctactggactgcgattcaccaaagctcatgtcactcatccagaacttaaatgcaca 619

                                                                       
Query: 181 ttcaatctagaaataattggagtgaagaaaaaccctaatggccctatgtacacctctctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcaatctagaaataattggagtgaagaaaaaccctaatggccctatgtacacctctctt 679

                                                                       
Query: 241 ggtgtcatgaccaagggaactattattgaggtgaattgcagtgaacttggtctggtcact 300
           ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggtgtcatgaccaaggggactataattgaggtgaattgcagtgaacttggtctggtcact 739

                                                                       
Query: 301 cctgcaggaaaagttgtgtggggtaagtatgctcaggttaccaataacccagaaaatgat 360
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 740 cctgcaggaaaagttgtgtggggtaaatatgctcaggttaccaataacccagaaaatgat 799

                                         
Query: 361 ggttgtataaatgctgtcttgcttgtttaa 390
           ||||||||||||||||| ||||||||||||
Sbjct: 800 ggttgtataaatgctgtattgcttgtttaa 829


>gnl|LJGI|TC59627 similar to UniRef100_A7QHR7 Cluster: Chromosome chr8 scaffold_99,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_99, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (82%)
          Length = 749

 Score =  557 bits (281), Expect = e-158
 Identities = 299/305 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttcaaagtggtccgcactggtaaaagaaagaccaagcaatggaagagaatggttacc 60
           ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgttcaaagtcgtccgcactggaaaaagaaagaccaagcaatggaagagaatggttacc 504

                                                                       
Query: 61  aaagctacatttgttgggcctggttttactagaaaacctccaaagtatgagcggttcatt 120
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 505 aaagctacatttgttgggcctggttttactaggaaacctcccaagtatgagcggttcatt 564

                                                                       
Query: 121 cgtcctactggactgcgattcaccaaagctcatgtcactcatccagaacttaaatgcaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cgtcctactggactgcgattcaccaaagctcatgtcactcatccagaacttaaatgcaca 624

                                                                       
Query: 181 ttcaatctagaaataattggagtgaagaaaaaccctaatggccctatgtacacctctctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttcaatctagaaataattggagtgaagaaaaaccctaatggccctatgtacacctctctt 684

                                                                       
Query: 241 ggtgtcatgaccaagggaactattattgaggtgaattgcagtgaacttggtctggtcact 300
           ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 685 ggtgtcatgaccaaggggactataattgaggtgaattgcagtgaacttggtctggtcact 744

                
Query: 301 cctgc 305
           |||||
Sbjct: 745 cctgc 749


>gnl|LJGI|BP059252 
          Length = 348

 Score =  107 bits (54), Expect = 5e-23
 Identities = 82/86 (95%), Gaps = 4/86 (4%)
 Strand = Plus / Minus

                                                                       
Query: 309 aaaagttgtgtggggtaagtatgctc-aggttacca-ataaccc-agaaaatgatggttg 365
           |||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 294 aaaagttgtgtggggtaagtatgctccaggttaccacataaccccagaaaatgatggttg 235

                                     
Query: 366 tataaatgctgtc-ttgcttgtttaa 390
           ||||||||||||| ||||||||||||
Sbjct: 234 tataaatgctgtctttgcttgtttaa 209