Miyakogusa Predicted Gene
- Lj2g3v1828460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1828460.1 Non Chatacterized Hit- tr|I1LHK9|I1LHK9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1947 PE=,70.25,0,no
description,Homeodomain-like; domain associated with HOX domains,POX;
Homeodomain,Homeodomain; se,CUFF.37865.1
(2286 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68249 similar to UniRef100_A7PV26 Cluster: Chromosome... 2476 0.0
gnl|LJGI|AV424608 homologue to UniRef100_Q9M7S0 Cluster: Homeodo... 232 8e-60
gnl|LJGI|TC62593 homologue to UniRef100_Q7Y0Z9 Cluster: Bell-lik... 84 4e-15
gnl|LJGI|TC70855 similar to UniRef100_A7PV26 Cluster: Chromosome... 62 2e-08
>gnl|LJGI|TC68249 similar to UniRef100_A7PV26 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 1600
Score = 2476 bits (1249), Expect = 0.0
Identities = 1252/1253 (99%)
Strand = Plus / Plus
Query: 1034 gtcaatttaagaaaagcaagttcagtaaccagaattcatcaaatcctggtggtggcggtg 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcaatttaagaaaagcaagttcagtaaccagaattcatcaaatcctggtggtggcggtg 60
Query: 1094 gcggcggtgattcttcaaaggaagctcctcctcctccgccgttgtcagcagctgatagaa 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcggcggtgattcttcaaaggaagctcctcctcctccgccgttgtcagcagctgatagaa 120
Query: 1154 ttgagcatcagagaaggaaggtcaaactcctagccatgcttgatgaggttgaccgaagat 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgagcatcagagaaggaaggtcaaactcctagccatgcttgatgaggttgaccgaagat 180
Query: 1214 acaaccactactgcgagcaaatgcagatggtggtgaattcatttgacctcatgatggggt 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acaaccactactgcgagcaaatgcagatggtggtgaattcatttgacctcatgatggggt 240
Query: 1274 tcggtgcggcagttccatacacagcactggcgcagaaggcaatgtctcggcacttccggt 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcggtgcggcagttccatacacagcactggcgcagaaggcaatgtctcggcacttccggt 300
Query: 1334 gcctgaaggaggcgattgcggcacagctaaagcacagttgtgaggtgctgggggagaaag 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcctgaaggaggcgattgcggcacagctaaagcacagttgtgaggtgctgggggagaaag 360
Query: 1394 atggggccgggggttcaggcttgacgaggggagagacgccgaggctgaagatgctggagc 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atggggccgggggttcaggcttgacgaggggagagacgccgaggctgaagatgctggagc 420
Query: 1454 agagcctgagacagcagagagcgttccagcagatggggatgatggaacaggaagcttgga 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agagcctgagacagcagagagcgttccagcagatggggatgatggaacaggaagcttgga 480
Query: 1514 gaccacagagagggttgcctgaacgatctgtcaacattttgagagcctggctttttgagc 1573
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 481 gaccacagagagggttgcctgaacgctctgtcaacattttgagagcctggctttttgagc 540
Query: 1574 attttcttcacccgtacccaagcgatgcagataagcatctgttggcaagacagactgggc 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 attttcttcacccgtacccaagcgatgcagataagcatctgttggcaagacagactgggc 600
Query: 1634 tatcaagaaatcaggtatcaaactggttcataaatgccagggtacggttgtggaaaccca 1693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatcaagaaatcaggtatcaaactggttcataaatgccagggtacggttgtggaaaccca 660
Query: 1694 tggtggaagagatgtaccaacaagaacgcaaagaagtagagtgtgcagaagagagagaaa 1753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tggtggaagagatgtaccaacaagaacgcaaagaagtagagtgtgcagaagagagagaaa 720
Query: 1754 ggaaccaaagcaatagtggccaacaacaagcacaaactccaaccacaccaccatcatctg 1813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggaaccaaagcaatagtggccaacaacaagcacaaactccaaccacaccaccatcatctg 780
Query: 1814 caacatcaacagcgccaccacctccaacaacaacaacgacaaaaccaacaggcaaaagat 1873
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 caacatcaacagcgccaccacctccaacaacaacaacgacaaaaccaacaggcaaaagat 840
Query: 1874 ccgatatcaatgccactgaaagcgacccttcactccatgcaatcaatagatcacaaagct 1933
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccgatatcaatgccactgaaagcgacccttcactccatgcaatcaatagatcacaaagct 900
Query: 1934 tctcggaaaaccaagcaaaccattcagccaccaccacggccatcaacaatgccaccaccg 1993
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tctcggaaaaccaagcaaaccattcagccaccaccacggccatcaacaatgccaccaccg 960
Query: 1994 cctctgaggtggcgccacccgtgtctcagtgctttgactcagtctcagacgatgacctgc 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cctctgaggtggcgccacccgtgtctcagtgctttgactcagtctcagacgatgacctgc 1020
Query: 2054 caccgcacaggtcaattatggccgcagacgacaagtgtcgccatggcagcttggttgcag 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 caccgcacaggtcaattatggccgcagacgacaagtgtcgccatggcagcttggttgcag 1080
Query: 2114 cagattacgggaccgcgcctgcaagtggtggtggtggtgacattggatccacactcatca 2173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 cagattacgggaccgcgcctgcaagtggtggtggtggtgacattggatccacactcatca 1140
Query: 2174 gatttgggaccaccgccggtgacgtgtcactcaccctagggctacgccacgccgggaaca 2233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 gatttgggaccaccgccggtgacgtgtcactcaccctagggctacgccacgccgggaaca 1200
Query: 2234 cgccggagaaaactaattccttctctgttagagactttggagggatttaatta 2286
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 cgccggagaaaactaattccttctctgttagagactttggagggatttaatta 1253
>gnl|LJGI|AV424608 homologue to UniRef100_Q9M7S0 Cluster: Homeodomain protein; n=1;
Malus x domestica|Rep: Homeodomain protein - Malus
domestica (Apple) (Malus sylvestris), partial (12%)
Length = 303
Score = 232 bits (117), Expect = 8e-60
Identities = 210/241 (87%)
Strand = Plus / Plus
Query: 1301 tggcgcagaaggcaatgtctcggcacttccggtgcctgaaggaggcgattgcggcacagc 1360
|||||||||| || ||||| || || ||||||||||||||||| ||||| || || |
Sbjct: 59 tggcgcagaaagccatgtcacgtcatttccggtgcctgaaggacgcgatactagcgcaac 118
Query: 1361 taaagcacagttgtgaggtgctgggggagaaagatggggccgggggttcaggcttgacga 1420
| ||||||||||||||| || |||||||||||||||| || | | |||| || |||||||
Sbjct: 119 tgaagcacagttgtgagctgttgggggagaaagatggagcggtgagttcggggttgacga 178
Query: 1421 ggggagagacgccgaggctgaagatgctggagcagagcctgagacagcagagagcgttcc 1480
||| |||||||| ||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 179 agggcgagacgccaaggcttaagatgcttgagcagagtttgagacagcagagagcgttcc 238
Query: 1481 agcagatggggatgatggaacaggaagcttggagaccacagagagggttgcctgaacgat 1540
| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 accaaatggggatgatggagcaggaagcttggagaccacagagagggttgcctgaacgat 298
Query: 1541 c 1541
|
Sbjct: 299 c 299
>gnl|LJGI|TC62593 homologue to UniRef100_Q7Y0Z9 Cluster: Bell-like homeodomain protein
3; n=1; Solanum lycopersicum|Rep: Bell-like homeodomain
protein 3 - Solanum lycopersicum (Tomato) (Lycopersicon
esculentum), partial (30%)
Length = 1304
Score = 83.8 bits (42), Expect = 4e-15
Identities = 123/150 (82%)
Strand = Plus / Plus
Query: 1561 tggctttttgagcattttcttcacccgtacccaagcgatgcagataagcatctgttggca 1620
||||| |||||||||||||||||||||||||||||||||| ||||| ||| | || ||
Sbjct: 215 tggctctttgagcattttcttcacccgtacccaagcgatgttgataaacatattttagcc 274
Query: 1621 agacagactgggctatcaagaaatcaggtatcaaactggttcataaatgccagggtacgg 1680
| || ||||| || || |||| |||||| ||||| ||||| || ||||| ||||| ||
Sbjct: 275 cgccaaactggtctctccagaagtcaggtttcaaattggtttatcaatgcaagggtgagg 334
Query: 1681 ttgtggaaacccatggtggaagagatgtac 1710
| ||||| || ||||||||||| ||||||
Sbjct: 335 ctttggaagccaatggtggaagaaatgtac 364
>gnl|LJGI|TC70855 similar to UniRef100_A7PV26 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 574
Score = 61.9 bits (31), Expect = 2e-08
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 2182 accaccgccggtgacgtgtcactcaccctagggctacgccacgccgggaac 2232
|||||||||||||| || || |||||| |||||||||| ||||||||||||
Sbjct: 313 accaccgccggtgatgtttctctcaccttagggctacgtcacgccgggaac 363