Miyakogusa Predicted Gene
- Lj2g3v1805140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1805140.1 Non Chatacterized Hit- tr|D7LVN7|D7LVN7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,23.84,0.000000000000004,coiled-coil,NULL; seg,NULL; FAMILY NOT
NAMED,NULL; DUF677,Protein of unknown function DUF677,CUFF.37848.1
(1142 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60001 similar to UniRef100_A7PV09 Cluster: Chromosome... 2198 0.0
gnl|LJGI|AV428627 similar to UniRef100_A7PV09 Cluster: Chromosom... 238 6e-62
gnl|LJGI|TC76087 weakly similar to UniRef100_A7PV09 Cluster: Chr... 238 6e-62
gnl|LJGI|TC72212 similar to UniRef100_A7PV09 Cluster: Chromosome... 139 4e-32
>gnl|LJGI|TC60001 similar to UniRef100_A7PV09 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 1401
Score = 2198 bits (1109), Expect = 0.0
Identities = 1133/1142 (99%), Gaps = 1/1142 (0%)
Strand = Plus / Plus
Query: 1 atggggggtcagtccagcaaaatgactactagcactgaggttccaacacccatccaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atggggggtcagtccagcaaaatgactactagcactgaggttccaacacccatccaaatg 193
Query: 61 ggtacacattctctgtatgctgctgatttgagctattatgaagctgcatgtgttgaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggtacacattctctgtatgctgctgatttgagctattatgaagctgcatgtgttgaggat 253
Query: 121 ccaaacttgcaatccttcgacgctaccattcaggagcgaaccaatagggtgataagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ccaaacttgcaatccttcgacgctaccattcaggagcgaaccaatagggtgataagctct 313
Query: 181 cttgctagtggggttgaggttcattccatatctattgactcactaggagaagtcactggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cttgctagtggggttgaggttcattccatatctattgactcactaggagaagtcactggt 373
Query: 241 agtcttcttgaaatgaaccaggaagttgtcaaggtcattctcgagtgcaagcaagatata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtcttcttgaaatgaaccaggaagttgtcaaggtcattctcgagtgcaagcaagatata 433
Query: 301 tggaacaagaaggaccgggatttattctccttggtggatgannnnnnngagaacagtctt 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 434 tggaacaagaaggaccgggatttattctccttggtggatgatttttttgagaacagtctt 493
Query: 361 cagacattggagttctgcaatgctcttgagaaatgcttgaaacgagcgcgtgaaaaactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cagacattggagttctgcaatgctcttgagaaatgcttgaaacgagcgcgtgaaaaactg 553
Query: 421 gttattgttaagtctgcaatgacttattttgaggacgaggcgcagaatgaggttggaggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gttattgttaagtctgcaatgacttattttgaggacgaggcgcagaatgaggttggaggg 613
Query: 481 tcaacttatgtaaagacattgcaagggcttaaggatttcaaggaagctggggaccctttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tcaacttatgtaaagacattgcaagggcttaaggatttcaaggaagctggggaccctttt 673
Query: 541 actgaagagttttattccttgtttcaatcagtgtttgcacaacaggtatcaatgctgaag 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 674 actgaagagttttattccttgtttcaatcagtgtt-gcacaacaggtatcaatgctgaag 732
Query: 601 aaattgcaatctagaaagcacaagcttgataagaagttgaaatccctcaagacattgaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 aaattgcaatctagaaagcacaagcttgataagaagttgaaatccctcaagacattgaag 792
Query: 661 agggtgtcaagtgtcattttcgtggctggttttgtctctgtgttgattttctcagtggtg 720
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 793 agggtgtcaagtgtcattttcgtggctgcttttgtctctgtgttgattttctcagtggtg 852
Query: 721 gcagctgcaattgctgcaccacctgtgataacggctctggctggtgcgttggctgttccg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 gcagctgcaattgctgcaccacctgtgataacggctctggctggtgcgttggctgttccg 912
Query: 781 ataggctcagtgggaaaatggtgtaactcactctttaagaaatatgagacagctctgaag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 ataggctcagtgggaaaatggtgtaactcactctttaagaaatatgagacagctctgaag 972
Query: 841 ggccaacgagaagtaatcaattcaatgcaggttggtacttacattcaattggtggacttg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 973 ggccaacgagaagtaatcaattcaatgcaggttggtacttacattcaattggtggacttg 1032
Query: 901 aaaaacatccgggttcgaatcgagcaattggaaataaagatggaatccatgttgcaaaat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1033 aaaaacatccgggttcgaatcgagcaattggaaataaagatggaatccatgttgcaaaat 1092
Query: 961 gctgattttgctcttacaaatgaggatggtgtaaggtttgcaattgatgagattaagaag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1093 gctgattttgctcttacaaatgaggatggtgtaaggtttgcaattgatgagattaagaag 1152
Query: 1021 aaaatagaaacttttgcggatatcattgattctttgagtgagcaagctgatcaatgtagt 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1153 aaaatagaaacttttgcggatatcattgattctttgagtgagcaagctgatcaatgtagt 1212
Query: 1081 cgtcagacaaggaaagcaaggacagtggttatacaaaagattattaaatattctggttga 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1213 cgtcagacaaggaaagcaaggacagtggttatacaaaagattattaaatattctggttga 1272
Query: 1141 ca 1142
||
Sbjct: 1273 ca 1274
>gnl|LJGI|AV428627 similar to UniRef100_A7PV09 Cluster: Chromosome chr4 scaffold_32
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:,
partial (3%)
Length = 284
Score = 238 bits (120), Expect = 6e-62
Identities = 120/120 (100%)
Strand = Plus / Plus
Query: 1 atggggggtcagtccagcaaaatgactactagcactgaggttccaacacccatccaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atggggggtcagtccagcaaaatgactactagcactgaggttccaacacccatccaaatg 224
Query: 61 ggtacacattctctgtatgctgctgatttgagctattatgaagctgcatgtgttgaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 ggtacacattctctgtatgctgctgatttgagctattatgaagctgcatgtgttgaggat 284
>gnl|LJGI|TC76087 weakly similar to UniRef100_A7PV09 Cluster: Chromosome chr4
scaffold_32, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_32, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (56%)
Length = 880
Score = 238 bits (120), Expect = 6e-62
Identities = 504/632 (79%)
Strand = Plus / Plus
Query: 487 tatgtaaagacattgcaagggcttaaggatttcaaggaagctggggacccttttactgaa 546
||||| ||||||||||| | ||| ||| |||| ||||| ||||||||||| ||||| ||
Sbjct: 90 tatgtgaagacattgcaggagctcaagaattttaaggatgctggggacccctttacagag 149
Query: 547 gagttttattccttgtttcaatcagtgtttgcacaacaggtatcaatgctgaagaaattg 606
|| ||||| || |||||||| ||| | | | || |||| || |||||| |||| ||
Sbjct: 150 gacttttactcgttgtttcagtcaacttatacgcagcaggcattgatgctgcagaagctg 209
Query: 607 caatctagaaagcacaagcttgataagaagttgaaatccctcaagacattgaagagggtg 666
||| |||||| |||||||||||||| || ||||| || ||||| | |||||||||
Sbjct: 210 caaatcagaaagagaaagcttgataagaaatttaaatcactgaagacttggaagagggtc 269
Query: 667 tcaagtgtcattttcgtggctggttttgtctctgtgttgattttctcagtggtggcagct 726
|||| || |||||||||||||| ||| || ||||||||||||||||||||||| ||||||
Sbjct: 270 tcaaatgccattttcgtggctgctttcgtttctgtgttgattttctcagtggtagcagct 329
Query: 727 gcaattgctgcaccacctgtgataacggctctggctggtgcgttggctgttccgataggc 786
| ||||||| ||||| || |||| ||| | |||| ||| |||||||||| |||||
Sbjct: 330 tctgttgctgcgccaccagtagtaacagctttagctgctgccatggctgttccaataggg 389
Query: 787 tcagtgggaaaatggtgtaactcactctttaagaaatatgagacagctctgaagggccaa 846
||||| ||||| |||||||||||||| |||||| ||| ||| |||||| | | |||
Sbjct: 390 tcagtaggaaagtggtgtaactcactttttaagcgatacaagaaagctctaatgaaacaa 449
Query: 847 cgagaagtaatcaattcaatgcaggttggtacttacattcaattggtggacttgaaaaac 906
|| || ||||||| ||||||||||||||||||| |||| |||| ||||||| | |||
Sbjct: 450 cgggaggtaatcagctcaatgcaggttggtactttcatttcattgaaggacttggacaac 509
Query: 907 atccgggttcgaatcgagcaattggaaataaagatggaatccatgttgcaaaatgctgat 966
|| ||||||| | ||| |||||||| || || | || || | ||||| |||||||||
Sbjct: 510 attcgggttcttaccgacaaattggaattacagcttgagtcattattgcagaatgctgat 569
Query: 967 tttgctcttacaaatgaggatggtgtaaggtttgcaattgatgagattaagaagaaaata 1026
|||||||||| ||| ||||||| | | | | ||||||| ||||||||||||||||| |||
Sbjct: 570 tttgctcttagaaacgaggatgttattaagattgcaatagatgagattaagaagaacata 629
Query: 1027 gaaacttttgcggatatcattgattctttgagtgagcaagctgatcaatgtagtcgtcag 1086
||||||||| | || | ||| ||| |||| || | || |||||| |||||||| | |||
Sbjct: 630 gaaactttttcagagaccatggatactttaagcgcacatgctgataaatgtagtagacag 689
Query: 1087 acaaggaaagcaaggacagtggttatacaaaa 1118
| ||||| |||| |||| |||||||| |||||
Sbjct: 690 ataaggagagcagggactgtggttattcaaaa 721
>gnl|LJGI|TC72212 similar to UniRef100_A7PV09 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 659
Score = 139 bits (70), Expect = 4e-32
Identities = 202/246 (82%)
Strand = Plus / Plus
Query: 58 atgggtacacattctctgtatgctgctgatttgagctattatgaagctgcatgtgttgag 117
|||||||| ||||| |||||||| ||||||||||||| ||||||||| ||||||| |
Sbjct: 292 atgggtacccattccctgtatgcagctgatttgagctcctatgaagctacatgtgtgaaa 351
Query: 118 gatccaaacttgcaatccttcgacgctaccattcaggagcgaaccaatagggtgataagc 177
||||||| ||||||||| || || || |||||||||| || ||||| |||||||| ||
Sbjct: 352 gatccaagcttgcaatcttttgatgccaccattcaggggcacaccaacagggtgattagt 411
Query: 178 tctcttgctagtggggttgaggttcattccatatctattgactcactaggagaagtcact 237
|| |||||| |||||||||||||| || | ||| ||||||| || ||||||| |||
Sbjct: 412 tcccttgctcatggggttgaggttcgatcgttgtcttttgactcgctgagagaagtgact 471
Query: 238 ggtagtcttcttgaaatgaaccaggaagttgtcaaggtcattctcgagtgcaagcaagat 297
| |||| | ||||| |||||||||||||| ||||| || ||| | || |||||| |||||
Sbjct: 472 gatagtttgcttgagatgaaccaggaagtagtcaaagttattttggattgcaagaaagat 531
Query: 298 atatgg 303
||||||
Sbjct: 532 atatgg 537