Miyakogusa Predicted Gene
- Lj2g3v1804130.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1804130.1 Non Chatacterized Hit- tr|I1MNI2|I1MNI2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2365 PE=,68.95,0,no
description,Terpenoid synthase; GERANYL GERANYL PYROPHOSPHATE
SYNTHASE,NULL; GERANYLGERANYL PYROP,CUFF.37847.1
(1129 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75443 similar to UniRef100_A7PV07 Cluster: Chromosome... 1606 0.0
gnl|LJGI|TC72159 similar to UniRef100_Q94ID7 Cluster: Geranylger... 698 0.0
gnl|LJGI|TC64307 similar to UniRef100_Q42698 Cluster: Geranylger... 165 7e-40
gnl|LJGI|TC59017 similar to UniRef100_A7PV07 Cluster: Chromosome... 135 7e-31
gnl|LJGI|BP047033 similar to UniRef100_Q9SSU0 Cluster: Geranylge... 72 8e-12
>gnl|LJGI|TC75443 similar to UniRef100_A7PV07 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (50%)
Length = 819
Score = 1606 bits (810), Expect = 0.0
Identities = 810/810 (100%)
Strand = Plus / Plus
Query: 1 atgagttcactgaattttggtacatggccaagtcccacttgtttgttaaaccaaggtgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 atgagttcactgaattttggtacatggccaagtcccacttgtttgttaaaccaaggtgga 69
Query: 61 agaaatcccccaactcccaattccatttttcacagcctcagaaggattccaattccctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 agaaatcccccaactcccaattccatttttcacagcctcagaaggattccaattccctcc 129
Query: 121 attaccaatgaactgggaagaaaatcaatttcttcgtcttcttctatttcttcttcccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 attaccaatgaactgggaagaaaatcaatttcttcgtcttcttctatttcttcttcccct 189
Query: 181 ctagtcatctctgcagtggctactaacttagacatactcacagtcgaagaactcaaatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ctagtcatctctgcagtggctactaacttagacatactcacagtcgaagaactcaaatcc 249
Query: 241 acacccaagttcaacttcgaagcctacatgctccaaaaggcccacacaatcaacaaggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acacccaagttcaacttcgaagcctacatgctccaaaaggcccacacaatcaacaaggca 309
Query: 301 ttggacgcagcaattcccctgaaggagccagagaagatccaccaagccatgcgatactcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttggacgcagcaattcccctgaaggagccagagaagatccaccaagccatgcgatactcc 369
Query: 361 ctcctcgccggcggcaagcgcgtccggccggtgctatgcatcgccgcctgcgagctcgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctcctcgccggcggcaagcgcgtccggccggtgctatgcatcgccgcctgcgagctcgtc 429
Query: 421 ggcggggatgagcaaaccgccatgcccgctgcctgtgccgtggagataatccataccatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggcggggatgagcaaaccgccatgcccgctgcctgtgccgtggagataatccataccatg 489
Query: 481 tcactcatccacgatgacctcccctgcatggacaacgacgatctccggcgagggaggccc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcactcatccacgatgacctcccctgcatggacaacgacgatctccggcgagggaggccc 549
Query: 541 accaaccacaaggccttcggcgagaacttcgcagtcctcgccggcgacgcgctcctcgcc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 accaaccacaaggccttcggcgagaacttcgcagtcctcgccggcgacgcgctcctcgcc 609
Query: 601 ttcgccttcgagcacttaacgtgctcgaaggtggcgccgggaagggtggttcgcgcggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttcgccttcgagcacttaacgtgctcgaaggtggcgccgggaagggtggttcgcgcggtt 669
Query: 661 gctgagctagcaaaatcggtcggaggagaagggttagttgcagggcaaactgtggatatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gctgagctagcaaaatcggtcggaggagaagggttagttgcagggcaaactgtggatatt 729
Query: 721 gactcggaaggtgtgtcggatgtgggactagagaggcttgaatacattcacgtgcacaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gactcggaaggtgtgtcggatgtgggactagagaggcttgaatacattcacgtgcacaaa 789
Query: 781 accgcggtgctgttggaggcttcggttgtg 810
||||||||||||||||||||||||||||||
Sbjct: 790 accgcggtgctgttggaggcttcggttgtg 819
>gnl|LJGI|TC72159 similar to UniRef100_Q94ID7 Cluster: Geranylgeranyl pyrophosphate
synthetase, chloroplast precursor (GGPP synthetase)
[Includes: Dimethylallyltranstransferase ;
Geranyltranstransferase ; Farnesyltranstransferase ];
n=1; Hevea brasiliensis|Rep: Geranylgeranyl pyrophosphate
synthetase, chloroplast precursor (GGPP synthetase)
[Includes: Dimethylallyltranstransferase ;
Geranyltranstransferase ; Farnesyltranstransferase ] -
Hevea brasiliensis (Para rubber tree), partial (31%)
Length = 553
Score = 698 bits (352), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Plus
Query: 778 aaaaccgcggtgctgttggaggcttcggttgtgttgggagcaatcatgggtggtggttcc 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaaccgcggtgctgttggaggcttcggttgtgttgggagcaatcatgggtggtggttcc 60
Query: 838 gacgaggaagttgaaaggttgaggaagtttgcgaggtgcattgggttgttgtttcaggtg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacgaggaagttgaaaggttgaggaagtttgcgaggtgcattgggttgttgtttcaggtg 120
Query: 898 gtggatgacattcttgatgtgaccaaatcgtctgaggaactggggaagacagcagggaag 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtggatgacattcttgatgtgaccaaatcgtctgaggaactggggaagacagcagggaag 180
Query: 958 gacttggtggctgataaggtcacataccctaaacttttagggattgaaaaatcgaaggaa 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gacttggtggctgataaggtcacataccctaaacttttagggattgaaaaatcgaaggaa 240
Query: 1018 tttgctgcaaaattgaacaaggaagcacacaagcaactcgcagggtttgatccggaaaag 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tttgctgcaaaattgaacaaggaagcacacaagcaactcgcagggtttgatccggaaaag 300
Query: 1078 gctgctcctttgttagctttagctaattacattgctcacaggcaaaactaga 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgctcctttgttagctttagctaattacattgctcacaggcaaaactaga 352
>gnl|LJGI|TC64307 similar to UniRef100_Q42698 Cluster: Geranylgeranyl pyrophosphate
synthetase, chloroplast precursor (GGPP synthetase)
(GGPS) [Includes: Dimethylallyltranstransferase ;
Geranyltranstransferase ; Farnesyltranstransferase ];
n=1; Catharanthus roseus|Rep: Geranylgeranyl
pyrophosphate synthetase, chloroplast precursor (GGPP
synthetase) (GGPS) [Includes:
Dimethylallyltranstransferase ; Geranyltranstransferase ;
Farnesyltranstransferase ] - Catharanthus roseus (Rosy
periwinkle) (Madagascar periwinkle), partial (56%)
Length = 752
Score = 165 bits (83), Expect = 7e-40
Identities = 233/283 (82%)
Strand = Plus / Plus
Query: 847 gttgaaaggttgaggaagtttgcgaggtgcattgggttgttgtttcaggtggtggatgac 906
||||| ||| ||||||| ||||| || |||||||| ||||||||||||||||| |||||
Sbjct: 327 gttgagaggctgaggaaatttgctagctgcattggattgttgtttcaggtggttgatgat 386
Query: 907 attcttgatgtgaccaaatcgtctgaggaactggggaagacagcagggaaggacttggtg 966
|||||||||||||| || || || ||||| ||||||| || || || || || ||||||
Sbjct: 387 attcttgatgtgacaaagtcttcacaggaattggggaaaactgctggaaaagatttggtg 446
Query: 967 gctgataaggtcacataccctaaacttttagggattgaaaaatcgaaggaatttgctgca 1026
||||||||||| || ||||| || ||||| ||||| || || || ||||| |||||||
Sbjct: 447 gctgataaggttacttaccccaagcttttggggatagagaagtccaaggagtttgctgag 506
Query: 1027 aaattgaacaaggaagcacacaagcaactcgcagggtttgatccggaaaaggctgctcct 1086
|| |||||| || ||||| | |||||| ||||||||||| | || |||||||||
Sbjct: 507 aagttgaaccgtgatgcacaggaacaactcattgggtttgatcctcataaagctgctcct 566
Query: 1087 ttgttagctttagctaattacattgctcacaggcaaaactaga 1129
||| | ||||||||||||||||||||| |||||||||||||||
Sbjct: 567 ttgattgctttagctaattacattgcttacaggcaaaactaga 609
Score = 79.8 bits (40), Expect = 3e-14
Identities = 76/88 (86%)
Strand = Plus / Plus
Query: 527 ggcgagggaggcccaccaaccacaaggccttcggcgagaacttcgcagtcctcgccggcg 586
||||||||| ||| || ||||| |||| ||||| ||| || | || |||||||||||||
Sbjct: 1 ggcgagggaagccgacgaaccataaggttttcggggaggacgtggcggtcctcgccggcg 60
Query: 587 acgcgctcctcgccttcgccttcgagca 614
||||||| ||||||||||||||||||||
Sbjct: 61 acgcgcttctcgccttcgccttcgagca 88
>gnl|LJGI|TC59017 similar to UniRef100_A7PV07 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 785
Score = 135 bits (68), Expect = 7e-31
Identities = 182/220 (82%)
Strand = Plus / Plus
Query: 334 aagatccaccaagccatgcgatactccctcctcgccggcggcaagcgcgtccggccggtg 393
|||||||| |||| ||||| ||||| |||||||||||||| ||| | ||| |||||||
Sbjct: 560 aagatccatgaagcgatgcggtactcgctcctcgccggcgggaagagagtcaggccggtt 619
Query: 394 ctatgcatcgccgcctgcgagctcgtcggcggggatgagcaaaccgccatgcccgctgcc 453
|| ||| |||||||||||||||||||||| ||| ||||| | || ||||| || ||
Sbjct: 620 ctctgcctcgccgcctgcgagctcgtcggagggactgagcccatggcgatgccggcggcg 679
Query: 454 tgtgccgtggagataatccataccatgtcactcatccacgatgacctcccctgcatggac 513
|| || | || || ||||| |||||||| ||||| |||||||||||||| || ||||||
Sbjct: 680 tgcgcgcttgaaatgatccacaccatgtcgctcattcacgatgacctcccttgtatggac 739
Query: 514 aacgacgatctccggcgagggaggcccaccaaccacaagg 553
|||||||||||||||||||||| ||| || ||||| ||||
Sbjct: 740 aacgacgatctccggcgagggaagccgacgaaccataagg 779
>gnl|LJGI|BP047033 similar to UniRef100_Q9SSU0 Cluster: Geranylgeranyl pyrophosphate
synthase; n=1; Croton sublyratus|Rep: Geranylgeranyl
pyrophosphate synthase - Croton sublyratus, partial
(22%)
Length = 379
Score = 71.9 bits (36), Expect = 8e-12
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 883 ttgttgtttcaggtggtggatgacattcttgatgtgaccaaatcgtctgaggaactgggg 942
||||||||||||||||| ||||| ||||||||||||||||| || || || | |||||
Sbjct: 376 ttgttgtttcaggtggttgatgatattcttgatgtgaccaagtcttcaccgggattgggg 317
Query: 943 aagacagcagggaaggacttggtggctgataaggtcacataccc 986
| || || ||||| || ||||||||||||||||| || |||||
Sbjct: 316 gaaactgctgggaaagatttggtggctgataaggttacttaccc 273
Score = 60.0 bits (30), Expect = 3e-08
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 1060 gggtttgatccggaaaaggctgctcctttgttagctttagctaattacattgctcacagg 1119
||||||||||| | || |||||||| ||| | ||||||||||||||| ||||| |||||
Sbjct: 198 gggtttgatcctcataaagctgctcccttgattgctttagctaattaccttgcttacagg 139
Query: 1120 caaaactaga 1129
| ||||||||
Sbjct: 138 ccaaactaga 129