Miyakogusa Predicted Gene
- Lj2g3v1779750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1779750.1 tr|B9MXR2|B9MXR2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_796816 PE=4
SV=1,71.15,0,SUBFAMILY NOT NAMED,NULL; SERINE/THREONINE-PROTEIN KINASE
RIO,NULL; ZINC_FINGER_C2H2_2,Zinc finger, ,CUFF.37819.1
(1512 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 1209 0.0
gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromoso... 507 e-143
gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromos... 311 7e-84
gnl|LJGI|DC597785 homologue to UniRef100_Q9LVQ7 Cluster: Zinc fi... 153 4e-36
gnl|LJGI|BW628664 homologue to UniRef100_A7PUY6 Cluster: Chromos... 109 5e-23
gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc fi... 103 3e-21
gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromoso... 100 5e-20
gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromos... 98 2e-19
gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc fing... 82 1e-14
gnl|LJGI|TC71214 similar to UniRef100_A7QBW4 Cluster: Chromosome... 72 1e-11
gnl|LJGI|CB827691 homologue to UniRef100_A7P6S4 Cluster: Chromos... 68 2e-10
gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finge... 58 2e-07
gnl|LJGI|TC71794 homologue to UniRef100_Q0DUA0 Cluster: Os03g019... 56 7e-07
>gnl|LJGI|TC78698 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (65%)
Length = 781
Score = 1209 bits (610), Expect = 0.0
Identities = 653/666 (98%), Gaps = 6/666 (0%)
Strand = Plus / Plus
Query: 106 gccaagaagaagcgaaacctccccggaatgccagatccagatgcagaggtgattgctctg 165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gccaagaagaagcgaaacctccccggaatgccagatccagatgcagaggtgattgctctg 181
Query: 166 tcaccgaagaccctgatggcgacgaacagatttgtatgtgaaatatgcaacaaggggttt 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcaccgaagaccctgatggcgacgaacagatttgtatgtgaaatatgcaacaaggggttt 241
Query: 226 cagagggatcagaatcttcagctccatcgacgggggcacaatctgccatggaagctgagg 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cagagggatcagaatcttcagctccatcgacgggggcacaatctgccatggaagctgagg 301
Query: 286 cagaggtcaagcaaggaggtgaggaagagggtgtatgtttgtcctgaaccgacgtgtgtt 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 302 cagaggtcaagcaaggaggtgaggaagagggtgtatgtttgtcctgaaccgacgtgtgct 361
Query: 346 catcacgatccttctagagctttgggtgatctcacggggattaagaagcatttctgcaga 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 catcacgatccttctagagctttgggtgatctcacggggattaagaagcatttctgcaga 421
Query: 406 aaacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttcaatcg 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aaacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttcaatcg 481
Query: 466 gattggaaagctcactccaagatttgcggtaccagagagtataaatgcgattgtggaact 525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gattggaaagctcactccaagatttgcggtaccagagagtataaatgcgattgtggaact 541
Query: 526 ttgttttcaaggagggatagcttcatcacgcatagggcgttttgtgatgcgttagcagag 585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttgttttcaaggagggatagcttcatcacgcatagggcgttttgtgatgcgttagcagag 601
Query: 586 gaaagtgcaagatctcatcctcaatctgctgcaaagggtagtccagaatcagaatccaaa 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaaagtgcaagatctcatcctcaatctgctgcaaagggtagtccagaatcagaatccaaa 661
Query: 646 gctgcaaccggcgattcagcaccttctgtgccggcggcagttgcttctcagtcaaacagt 705
|||||||||||||||||||||||||||||||||||||| || | | | |||| |
Sbjct: 662 gctgcaaccggcgattcagcaccttctgtgccggcggc----gc--cactggataacatt 715
Query: 706 gttgtcttatctactctgcagactcagaatacagaattgccagaaaattccccacaaatt 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gttgtcttatctactctgcagactcagaatacagaattgccagaaaattccccacaaatt 775
Query: 766 atagag 771
||||||
Sbjct: 776 atagag 781
Score = 147 bits (74), Expect = 2e-34
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 atgcctgttgatttggataacgtttccactgcttcaggggaagctagtgtctcttcctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 atgcctgttgatttggataacgtttccactgcttcaggggaagctagtgtctcttcctct 76
Query: 61 ggcaatcagatagt 74
||||||||||||||
Sbjct: 77 ggcaatcagatagt 90
>gnl|LJGI|TC60668 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (60%)
Length = 951
Score = 507 bits (256), Expect = e-143
Identities = 436/496 (87%)
Strand = Plus / Plus
Query: 107 ccaagaagaagcgaaacctccccggaatgccagatccagatgcagaggtgattgctctgt 166
||||||| || |||||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 186 ccaagaaaaaacgaaaccttcctggaatgccagatccagaagcagaggtgattgctctgt 245
Query: 167 caccgaagaccctgatggcgacgaacagatttgtatgtgaaatatgcaacaaggggtttc 226
|||||||||| || ||||||||||||||||| ||||| ||||| |||||||| |||||||
Sbjct: 246 caccgaagactctaatggcgacgaacagattcgtatgcgaaatttgcaacaaagggtttc 305
Query: 227 agagggatcagaatcttcagctccatcgacgggggcacaatctgccatggaagctgaggc 286
||||||| |||||||| ||||| || || | || |||||||||||||||||||||||||
Sbjct: 306 agagggaccagaatctgcagcttcaccggagaggtcacaatctgccatggaagctgaggc 365
Query: 287 agaggtcaagcaaggaggtgaggaagagggtgtatgtttgtcctgaaccgacgtgtgttc 346
||||| | ||||||||||||||||||||||||||||| || || ||||| |||||||| |
Sbjct: 366 agaggacgagcaaggaggtgaggaagagggtgtatgtctgcccggaaccaacgtgtgtcc 425
Query: 347 atcacgatccttctagagctttgggtgatctcacggggattaagaagcatttctgcagaa 406
| || || |||||| |||| |||||||||||||| || ||||| ||||| ||||||||||
Sbjct: 426 accatgacccttctcgagcgttgggtgatctcaccggaattaaaaagcacttctgcagaa 485
Query: 407 aacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttcaatcgg 466
| || || ||||||||||||||||| || || ||||| ||||||||||| |||||||| |
Sbjct: 486 agcacggtgagaagaagtggaaatgcgagaaatgctccaagaaatatgcagttcaatctg 545
Query: 467 attggaaagctcactccaagatttgcggtaccagagagtataaatgcgattgtggaactt 526
|||||||||||||||||||| ||||||||||||||||||||||||| || || || ||
Sbjct: 546 attggaaagctcactccaaggtttgcggtaccagagagtataaatgtgactgcggcacgg 605
Query: 527 tgttttcaaggagggatagcttcatcacgcatagggcgttttgtgatgcgttagcagagg 586
||||||| ||||||||||||||||| || ||||| || ||||| |||||||| |||||||
Sbjct: 606 tgttttcgaggagggatagcttcattactcatagagctttttgcgatgcgttggcagagg 665
Query: 587 aaagtgcaagatctca 602
| ||| ||||||||||
Sbjct: 666 agagtacaagatctca 681
Score = 58.0 bits (29), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 1 atgcctgttgatttggataacgtttccactgcttcaggggaag---ctagtgtctcttcc 57
|||||||||||||| || || |||||||| |||||||||||| ||||||| ||||||
Sbjct: 98 atgcctgttgattttgacaatgtttccacaccttcaggggaagcacctagtgtttcttcc 157
Query: 58 tctggcaatca 68
||||| |||||
Sbjct: 158 tctggtaatca 168
>gnl|LJGI|BW623067 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (37%)
Length = 516
Score = 311 bits (157), Expect = 7e-84
Identities = 265/301 (88%)
Strand = Plus / Plus
Query: 107 ccaagaagaagcgaaacctccccggaatgccagatccagatgcagaggtgattgctctgt 166
||||||| || |||||||| || ||||||||||||||||| |||||||||||||||||||
Sbjct: 206 ccaagaaaaaacgaaaccttcctggaatgccagatccagaagcagaggtgattgctctgt 265
Query: 167 caccgaagaccctgatggcgacgaacagatttgtatgtgaaatatgcaacaaggggtttc 226
|||||||||| || ||||||||||||||||| ||||| ||||| |||||||| |||||||
Sbjct: 266 caccgaagactctaatggcgacgaacagattcgtatgcgaaatttgcaacaaagggtttc 325
Query: 227 agagggatcagaatcttcagctccatcgacgggggcacaatctgccatggaagctgaggc 286
||||||| |||||||| ||||| || || | || |||||||||||||||||||||||||
Sbjct: 326 agagggaccagaatctgcagcttcaccggagaggtcacaatctgccatggaagctgaggc 385
Query: 287 agaggtcaagcaaggaggtgaggaagagggtgtatgtttgtcctgaaccgacgtgtgttc 346
||||| | ||||||||||||||||||||||||||||| || || ||||| ||| |||| |
Sbjct: 386 agaggacgagcaaggaggtgaggaagagggtgtatgtctgcccggaaccaacgcgtgtcc 445
Query: 347 atcacgatccttctagagctttgggtgatctcacggggattaagaagcatttctgcagaa 406
| || || |||||| |||| |||||||||||||| || ||||| ||||| ||||||||||
Sbjct: 446 accatgacccttctcgagcgttgggtgatctcaccggaattaaaaagcacttctgcagaa 505
Query: 407 a 407
|
Sbjct: 506 a 506
Score = 58.0 bits (29), Expect = 2e-07
Identities = 61/71 (85%), Gaps = 3/71 (4%)
Strand = Plus / Plus
Query: 1 atgcctgttgatttggataacgtttccactgcttcaggggaag---ctagtgtctcttcc 57
|||||||||||||| || || |||||||| |||||||||||| ||||||| ||||||
Sbjct: 118 atgcctgttgattttgacaatgtttccacaccttcaggggaagcacctagtgtttcttcc 177
Query: 58 tctggcaatca 68
||||| |||||
Sbjct: 178 tctggtaatca 188
>gnl|LJGI|DC597785 homologue to UniRef100_Q9LVQ7 Cluster: Zinc finger protein; n=1;
Arabidopsis thaliana|Rep: Zinc finger protein -
Arabidopsis, partial (2%)
Length = 548
Score = 153 bits (77), Expect = 4e-36
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 1436 tagatgttacgtctgcagcagcatcctttggtaatggagaattctctggcaaagatattg 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tagatgttacgtctgcagcagcatcctttggtaatggagaattctctggcaaagatattg 489
Query: 1496 ggggcaacacttgaatg 1512
|||||||||||||||||
Sbjct: 488 ggggcaacacttgaatg 472
>gnl|LJGI|BW628664 homologue to UniRef100_A7PUY6 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 475
Score = 109 bits (55), Expect = 5e-23
Identities = 55/55 (100%)
Strand = Plus / Plus
Query: 1 atgcctgttgatttggataacgtttccactgcttcaggggaagctagtgtctctt 55
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgcctgttgatttggataacgtttccactgcttcaggggaagctagtgtctctt 475
>gnl|LJGI|DC594840 homologue to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (16%)
Length = 418
Score = 103 bits (52), Expect = 3e-21
Identities = 76/84 (90%)
Strand = Plus / Plus
Query: 402 cagaaaacatggcgagaagaagtggaaatgtgacaagtgctctaagaaatatgcggttca 461
|||||| ||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 11 cagaaagcatggtgagaagaagtggaaatgtgaaaagtgctccaagaagtatgcagttca 70
Query: 462 atcggattggaaagctcactccaa 485
||| || |||||||||||||||||
Sbjct: 71 atcagactggaaagctcactccaa 94
>gnl|LJGI|TC72355 homologue to UniRef100_A7PS38 Cluster: Chromosome chr14
scaffold_27, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_27, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 1231
Score = 99.6 bits (50), Expect = 5e-20
Identities = 95/110 (86%)
Strand = Plus / Plus
Query: 376 ctcacggggattaagaagcatttctgcagaaaacatggcgagaagaagtggaaatgtgac 435
||||| || ||||||||||| ||||||||||| || |||||||| || ||||||||||||
Sbjct: 709 ctcactggcattaagaagcacttctgcagaaagcacggcgagaaaaaatggaaatgtgac 768
Query: 436 aagtgctctaagaaatatgcggttcaatcggattggaaagctcactccaa 485
|||||||| ||||| || || |||||||| || |||| ||| ||||||||
Sbjct: 769 aagtgctccaagaagtacgctgttcaatctgactggagagcacactccaa 818
>gnl|LJGI|DC593437 homologue to UniRef100_A7NZH2 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 589
Score = 97.6 bits (49), Expect = 2e-19
Identities = 151/185 (81%)
Strand = Plus / Plus
Query: 388 aagaagcatttctgcagaaaacatggcgagaagaagtggaaatgtgacaagtgctctaag 447
||||| || ||| ||||||||||||| |||||||||||||| ||||| |||||||| |||
Sbjct: 347 aagaaacacttcagcagaaaacatggtgagaagaagtggaagtgtgagaagtgctccaag 406
Query: 448 aaatatgcggttcaatcggattggaaagctcactccaagatttgcggtaccagagagtat 507
||||| || ||||| || |||||||| || || |||||||||| || || ||||||||
Sbjct: 407 aaatacgctgttcattccgattggaaggcccatgccaagatttgtgggactagagagtac 466
Query: 508 aaatgcgattgtggaactttgttttcaaggagggatagcttcatcacgcatagggcgttt 567
|| || || ||||| || | || || |||| ||| |||||||| || ||||| || |||
Sbjct: 467 aagtgtgactgtggcacacttttctccaggaaggacagcttcataactcatagagctttt 526
Query: 568 tgtga 572
|||||
Sbjct: 527 tgtga 531
>gnl|LJGI|AV772572 similar to UniRef100_Q10QG1 Cluster: Zinc finger, C2H2 type family
protein, expressed; n=1; Oryza sativa Japonica
Group|Rep: Zinc finger, C2H2 type family protein,
expressed - Oryza sativa subsp. japonica (Rice), partial
(23%)
Length = 491
Score = 81.8 bits (41), Expect = 1e-14
Identities = 80/93 (86%)
Strand = Plus / Minus
Query: 388 aagaagcatttctgcagaaaacatggcgagaagaagtggaaatgtgacaagtgctctaag 447
|||||||| ||| ||||||| || || |||||||||||||| ||||| |||||||| |||
Sbjct: 258 aagaagcacttcagcagaaagcacggtgagaagaagtggaagtgtgagaagtgctccaag 199
Query: 448 aaatatgcggttcaatcggattggaaagctcac 480
||||| || || | ||| |||||||||||||||
Sbjct: 198 aaatacgcagtcccatcagattggaaagctcac 166
Score = 65.9 bits (33), Expect = 7e-10
Identities = 120/149 (80%)
Strand = Plus / Minus
Query: 157 attgctctgtcaccgaagaccctgatggcgacgaacagatttgtatgtgaaatatgcaac 216
|||||||| || || |||||||| |||||||||||| | || || |||| |||||||||
Sbjct: 489 attgctctctcccctaagaccctcatggcgacgaaccgcttcgtctgtgttatatgcaac 430
Query: 217 aaggggtttcagagggatcagaatcttcagctccatcgacgggggcacaatctgccatgg 276
| || || ||||| || |||||||| |||||||| || | || ||||| || ||||||
Sbjct: 429 taaggcttccagagagaccagaatctccagctccacagaagaggccacaacctcccatgg 370
Query: 277 aagctgaggcagaggtcaagcaaggaggt 305
||||| ||||||| || | |||||||||
Sbjct: 369 aagctccggcagagatccaacaaggaggt 341
>gnl|LJGI|TC71214 similar to UniRef100_A7QBW4 Cluster: Chromosome chr1 scaffold_75,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_75, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 974
Score = 71.9 bits (36), Expect = 1e-11
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 1080 catgtccgccactgcattgctgcagaaagctgctcaaatgggtgcagccgcaacaa 1135
|||||| |||||||||||||| ||||||||||||||||||||| || |||| ||||
Sbjct: 222 catgtcagccactgcattgcttcagaaagctgctcaaatgggttcaaccgccacaa 277
>gnl|LJGI|CB827691 homologue to UniRef100_A7P6S4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (7%)
Length = 385
Score = 67.9 bits (34), Expect = 2e-10
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1080 catgtccgccactgcattgctgcagaaagctgctcaaatgggtgca 1125
|||||| ||||| ||||||||||||||||| |||||||||||||||
Sbjct: 204 catgtcagccacagcattgctgcagaaagcagctcaaatgggtgca 249
>gnl|LJGI|TC61639 similar to UniRef100_Q2HVE6 Cluster: Zinc finger, C2H2-type; n=1;
Medicago truncatula|Rep: Zinc finger, C2H2-type -
Medicago truncatula (Barrel medic), partial (17%)
Length = 805
Score = 58.0 bits (29), Expect = 2e-07
Identities = 74/89 (83%)
Strand = Plus / Plus
Query: 200 tatgtgaaatatgcaacaaggggtttcagagggatcagaatcttcagctccatcgacggg 259
||||||| || |||||||| || || || || ||||||||||||||||| ||| || | |
Sbjct: 717 tatgtgagatctgcaacaaaggattccaaagagatcagaatcttcagcttcatagaagag 776
Query: 260 ggcacaatctgccatggaagctgaggcag 288
|||||||| | ||||||||| ||| ||||
Sbjct: 777 ggcacaatttaccatggaagttgaagcag 805
>gnl|LJGI|TC71794 homologue to UniRef100_Q0DUA0 Cluster: Os03g0197800 protein; n=1;
Oryza sativa Japonica Group|Rep: Os03g0197800 protein -
Oryza sativa subsp. japonica (Rice), partial (3%)
Length = 666
Score = 56.0 bits (28), Expect = 7e-07
Identities = 88/108 (81%)
Strand = Plus / Plus
Query: 1339 aagcagaccaccctcgattttctcgggttggggatggctgttgggggcacccctggtgga 1398
|||||||||||||| ||||| | || |||||||||||||| || |||| |||||||
Sbjct: 165 aagcagaccacccttgatttcttaggattggggatggctgtgggtggcagttttggtgga 224
Query: 1399 ggcttatcagcactgatgacttctattggtggcggtctagatgttacg 1446
||| ||| ||||| ||||| | |||| |||||||| | |||||||||
Sbjct: 225 ggcatatttgcactcatgacatttattagtggcggtttggatgttacg 272