Miyakogusa Predicted Gene

Lj2g3v1768680.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1768680.1 tr|Q18KT7|Q18KT7_HALWD Transcription initiation
factor IIB OS=Haloquadratum walsbyi (strain DSM
1679,33.62,0.0000000004,TRANSCRIPTION INITIATION FACTOR IIB,NULL;
TRANSCRIPTION INITIATION FACTOR IIB-RELATED,Transcription
,gene.g42231.t1.1
         (660 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78492 similar to UniRef100_A8MR42 Cluster: Uncharacte...   694   0.0  

>gnl|LJGI|TC78492 similar to UniRef100_A8MR42 Cluster: Uncharacterized protein
           At4g36650.2; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At4g36650.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (37%)
          Length = 476

 Score =  694 bits (350), Expect = 0.0
 Identities = 350/350 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagagcgacaatcgcatccccaccacgtcttccacctccgcgcccaagacaaccct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 atggaagagcgacaatcgcatccccaccacgtcttccacctccgcgcccaagacaaccct 186

                                                                       
Query: 61  ctgtgcctcgccacctccgatctccctctcccgactctccaccaccaaaacgacgccggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctgtgcctcgccacctccgatctccctctcccgactctccaccaccaaaacgacgccggc 246

                                                                       
Query: 121 gacgaggaggaccctttcgaacccacgggcttcctcaccgcgttctccacctggtccctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gacgaggaggaccctttcgaacccacgggcttcctcaccgcgttctccacctggtccctg 306

                                                                       
Query: 181 gaacccagcccgctttaccttcagtcctccatcgcgttctccggccacctcgctgaactc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaacccagcccgctttaccttcagtcctccatcgcgttctccggccacctcgctgaactc 366

                                                                       
Query: 241 gagcgcactctcgaatcgtcttcttcttcttcagctacagtcgtggttgataacttgagg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gagcgcactctcgaatcgtcttcttcttcttcagctacagtcgtggttgataacttgagg 426

                                                             
Query: 301 gcgtacatgcagattatcgatgttgcctccattctgggcttggattgcga 350
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gcgtacatgcagattatcgatgttgcctccattctgggcttggattgcga 476