Miyakogusa Predicted Gene

Lj2g3v1758490.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1758490.1 Non Chatacterized Hit- tr|I1J8V2|I1J8V2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18802 PE,90.83,0,domain
present in cyclins, TFIIB and Retinob,Cyclin-like; TRANSCRIPTION
INITIATION FACTOR IIB,NULL; ,CUFF.37990.1
         (1044 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78492 similar to UniRef100_A8MR42 Cluster: Uncharacte...   900   0.0  

>gnl|LJGI|TC78492 similar to UniRef100_A8MR42 Cluster: Uncharacterized protein
           At4g36650.2; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At4g36650.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (37%)
          Length = 476

 Score =  900 bits (454), Expect = 0.0
 Identities = 457/458 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaaaggagaaaatgaagtgtccgtactgctcggcggcggctggccgttgcgccacc 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19  atggaaaaggggaaaatgaagtgtccgtactgctcggcggcggctggccgttgcgccacc 78

                                                                       
Query: 61  acgagctccggcaggtcaataacggagtgcacgtcttgcggccgggtcatggaagagcga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  acgagctccggcaggtcaataacggagtgcacgtcttgcggccgggtcatggaagagcga 138

                                                                       
Query: 121 caatcgcatccccaccacgtcttccacctccgcgcccaagacaaccctctgtgcctcgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 caatcgcatccccaccacgtcttccacctccgcgcccaagacaaccctctgtgcctcgcc 198

                                                                       
Query: 181 acctccgatctccctctcccgactctccaccaccaaaacgacgccggcgacgaggaggac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 acctccgatctccctctcccgactctccaccaccaaaacgacgccggcgacgaggaggac 258

                                                                       
Query: 241 cctttcgaacccacgggcttcctcaccgcgttctccacctggtccctggaacccagcccg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cctttcgaacccacgggcttcctcaccgcgttctccacctggtccctggaacccagcccg 318

                                                                       
Query: 301 ctttaccttcagtcctccatcgcgttctccggccacctcgctgaactcgagcgcactctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctttaccttcagtcctccatcgcgttctccggccacctcgctgaactcgagcgcactctc 378

                                                                       
Query: 361 gaatcgtcttcttcttcttcagctacagtcgtggttgataacttgagggcgtacatgcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaatcgtcttcttcttcttcagctacagtcgtggttgataacttgagggcgtacatgcag 438

                                                 
Query: 421 attatcgatgttgcctccattctgggcttggattgcga 458
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 439 attatcgatgttgcctccattctgggcttggattgcga 476