Miyakogusa Predicted Gene
- Lj2g3v1757320.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1757320.1 Non Chatacterized Hit- tr|C6TMS6|C6TMS6_SOYBN
Putative uncharacterized protein (Fragment)
OS=Glycine,73.44,2e-19,SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,NULL,CUFF.37803.1
(210 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59811 similar to UniRef100_A8MR89 Cluster: Uncharacte... 416 e-116
gnl|LJGI|TC71687 similar to UniRef100_A7PUV4 Cluster: Chromosome... 230 3e-60
gnl|LJGI|FS320647 similar to UniRef100_Q10DM3 Cluster: Expressed... 137 3e-32
>gnl|LJGI|TC59811 similar to UniRef100_A8MR89 Cluster: Uncharacterized protein
At3g50845.1; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At3g50845.1 - Arabidopsis
thaliana (Mouse-ear cress), partial (93%)
Length = 892
Score = 416 bits (210), Expect = e-116
Identities = 210/210 (100%)
Strand = Plus / Plus
Query: 1 atggcgacggttattggtctttgtctcagggttaaactaaagcactacttccctcctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atggcgacggttattggtctttgtctcagggttaaactaaagcactacttccctcctcat 370
Query: 61 tacaaagtggacatcaaagtgtctccaggatctcatgctgatgaagaatcagtcaataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tacaaagtggacatcaaagtgtctccaggatctcatgctgatgaagaatcagtcaataag 430
Query: 121 caattaaatgataaagaaagaattgctgctgccttggagaatcccaacctccgccagctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 caattaaatgataaagaaagaattgctgctgccttggagaatcccaacctccgccagctt 490
Query: 181 gtcgatgagtgtctctcctccaatgaactg 210
||||||||||||||||||||||||||||||
Sbjct: 491 gtcgatgagtgtctctcctccaatgaactg 520
>gnl|LJGI|TC71687 similar to UniRef100_A7PUV4 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 678
Score = 230 bits (116), Expect = 3e-60
Identities = 137/144 (95%)
Strand = Plus / Plus
Query: 67 gtggacatcaaagtgtctccaggatctcatgctgatgaagaatcagtcaataagcaatta 126
||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| ||||
Sbjct: 240 gtggacatccaagtgtctccaggatctcatgctgatgaagaatccgtccataagccatta 299
Query: 127 aatgataaagaaagaattgctgctgccttggagaatcccaacctccgccagcttgtcgat 186
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 300 aatgataaagaaagaattgctgctgccttggagaatccccacctccgcccgcttgtcgat 359
Query: 187 gagtgtctctcctccaatgaactg 210
||||||||||||||| ||||||||
Sbjct: 360 gagtgtctctcctcccatgaactg 383
>gnl|LJGI|FS320647 similar to UniRef100_Q10DM3 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (39%)
Length = 479
Score = 137 bits (69), Expect = 3e-32
Identities = 69/69 (100%)
Strand = Plus / Plus
Query: 1 atggcgacggttattggtctttgtctcagggttaaactaaagcactacttccctcctcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 atggcgacggttattggtctttgtctcagggttaaactaaagcactacttccctcctcat 412
Query: 61 tacaaagtg 69
|||||||||
Sbjct: 413 tacaaagtg 421