Miyakogusa Predicted Gene
- Lj2g3v1734790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1734790.1 Non Chatacterized Hit- tr|G1NPI7|G1NPI7_MELGA
Uncharacterized protein (Fragment) OS=Meleagris gallop,28.04,2e-18,no
description,Regulator of chromosome
condensation/beta-lactamase-inhibitor protein II;
RCC1/BLIP-I,CUFF.37778.1
(1305 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71625 similar to UniRef100_A7Q2U9 Cluster: Chromosome... 1181 0.0
gnl|LJGI|TC71565 weakly similar to UniRef100_A7Q2U9 Cluster: Chr... 1059 0.0
gnl|LJGI|BW599575 weakly similar to UniRef100_A7Q2U9 Cluster: Ch... 240 2e-62
>gnl|LJGI|TC71625 similar to UniRef100_A7Q2U9 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 596
Score = 1181 bits (596), Expect = 0.0
Identities = 596/596 (100%)
Strand = Plus / Plus
Query: 3 gtggcgatcacgatcacattcactggaactcttgagaatgtttcaggtgaaagcggtgca 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggcgatcacgatcacattcactggaactcttgagaatgtttcaggtgaaagcggtgca 60
Query: 63 gagatggatgagcacggtgatgagttttggagatggaacccacggtgctctcggattacc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagatggatgagcacggtgatgagttttggagatggaacccacggtgctctcggattacc 120
Query: 123 ttcctccgccgtcggtgtgggactcgacgcttacgaacctaccccaattccttctctacc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcctccgccgtcggtgtgggactcgacgcttacgaacctaccccaattccttctctacc 180
Query: 183 ttccgacattgttagcgtccacgccggtcactaccactccctcgccgtcacttctcaagg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccgacattgttagcgtccacgccggtcactaccactccctcgccgtcacttctcaagg 240
Query: 243 tcacctctgggcttggggaagaaacaacgaagctcaactcggccctggtttttcttccag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcacctctgggcttggggaagaaacaacgaagctcaactcggccctggtttttcttccag 300
Query: 303 tagagaatcatggaatgagccgaaaatggttgtgggattggagaatgtgaaggtttgtgc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagagaatcatggaatgagccgaaaatggttgtgggattggagaatgtgaaggtttgtgc 360
Query: 363 tgcttatgcttctggtgtggtttctgctgcggttggtgatgatggttctgtttgggtttg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgcttatgcttctggtgtggtttctgctgcggttggtgatgatggttctgtttgggtttg 420
Query: 423 ggggaaatccaaacgcggccagcttggtctcggaaaaggtgtcactgaggctgttgcacc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggggaaatccaaacgcggccagcttggtctcggaaaaggtgtcactgaggctgttgcacc 480
Query: 483 tgccaaactcgaagcgctttcaggggaaaacgtagcaaaggtttcatttggttgggggca 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgccaaactcgaagcgctttcaggggaaaacgtagcaaaggtttcatttggttgggggca 540
Query: 543 tgctcttgctcagactgtggatggcaagttgtttggctggggctatttggcagatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgctcttgctcagactgtggatggcaagttgtttggctggggctatttggcagatg 596
>gnl|LJGI|TC71565 weakly similar to UniRef100_A7Q2U9 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 843
Score = 1059 bits (534), Expect = 0.0
Identities = 544/546 (99%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 760 cgcggtgttcatgttgtcgacattgcgtgtgggcttgatcactctctgattcttttccgt 819
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcggtgttcatgt-gtcgacattgcgtgtgggcttgatcactctctgattcttttccgt 59
Query: 820 aatggcgccctcttaagctgcgggagcgacgcgtatggccagttggggcgagctagaccg 879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 aatggcgccctcttaagctgcgggagcgacgcgtatggccagttggggcgagctagaccg 119
Query: 880 gatttggggatttttccggttgatataagcttcaagcccgtttcaatagctgcagggctt 939
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gatttggggatttttccggttgatataagcttcaagcccgtttcaatagctgcagggctt 179
Query: 940 ggccattctttggctatatgcgagcttgatgaatcggatagtagtgtggggactacaaac 999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ggccattctttggctatatgcgagcttgatgaatcggatagtagtgtggggactacaaac 239
Query: 1000 attgcttcatggggttggaaccagagttctcagcttgggaggacagggcctgggaaccta 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 attgcttcatggggttggaaccagagttctcagcttgggaggacagggcctgggaaccta 299
Query: 1060 ccctctttgattgatgcattggatggggaaaatcctgtttcagtatcaggagggcgtgta 1119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccctctttgattgatgctttggatggggaaaatcctgtttcagtatcaggagggcgtgta 359
Query: 1120 cattcggttgctctcacagcaaaaggagaaatgtgggtctggggctctggcaaaaatggc 1179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cattcggttgctctcacagcaaaaggagaaatgtgggtctggggctctggcaaaaatggc 419
Query: 1180 agactcggattggcaagttctgttgacgaatttgagccaattcttcttgatactttagaa 1239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 agactcggattggcaagttctgttgacgaatttgagccaattcttcttgatactttagaa 479
Query: 1240 ggtttccaaattttacaggccgtgtcaggatttgatcataatctggtgctagttgctggc 1299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggtttccaaattttacaggccgtgtcaggatttgatcataatctggtgctagttgctggc 539
Query: 1300 tgatct 1305
||||||
Sbjct: 540 tgatct 545
>gnl|LJGI|BW599575 weakly similar to UniRef100_A7Q2U9 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 494
Score = 240 bits (121), Expect = 2e-62
Identities = 196/221 (88%)
Strand = Plus / Plus
Query: 79 gtgatgagttttggagatggaacccacggtgctctcggattaccttcctccgccgtcggt 138
||||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| |||||
Sbjct: 202 gtgatgagtttcggagatggaagccaaggtgctcttggatttccttcctccgccatcggt 261
Query: 139 gtgggactcgacgcttacgaacctaccccaattccttctctaccttccgacattgttagc 198
|||| ||||||| | ||||||||||||| | || || || |||||||| ||||||||||
Sbjct: 262 gtggaactcgacacctacgaacctacccgagtttctgctttaccttccaccattgttagc 321
Query: 199 gtccacgccggtcactaccactccctcgccgtcacttctcaaggtcacctctgggcttgg 258
| |||||||||||||||| ||||||||| |||||| || |||||||||||||||||||||
Sbjct: 322 gcccacgccggtcactacaactccctcgtcgtcacctcccaaggtcacctctgggcttgg 381
Query: 259 ggaagaaacaacgaagctcaactcggccctggtttttcttc 299
||||||||||| ||||||| ||||| || ||||||||||||
Sbjct: 382 ggaagaaacaatgaagctctactcgaccgtggtttttcttc 422