Miyakogusa Predicted Gene
- Lj2g3v1730230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1730230.1 Non Chatacterized Hit- tr|B9RPI9|B9RPI9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,60.61,0.0000000000001,seg,NULL; coiled-coil,NULL,CUFF.37908.1
(1281 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW623153 similar to UniRef100_A7PUR9 Cluster: Chromosom... 918 0.0
gnl|LJGI|BW599245 homologue to UniRef100_A8TSW4 Cluster: Asp/Glu... 123 3e-27
gnl|LJGI|TC70929 similar to UniRef100_O82090 Cluster: Fiber anne... 56 6e-07
gnl|LJGI|AV408579 54 2e-06
>gnl|LJGI|BW623153 similar to UniRef100_A7PUR9 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 482
Score = 918 bits (463), Expect = 0.0
Identities = 469/471 (99%)
Strand = Plus / Plus
Query: 384 aaaacctgaacttgaagacaagcaggtgaatggtgtctgtggtggtgaacttgatagaag 443
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 12 aaaacctgaacttgaagacaagcaggcgtatggtgtctgtggtggtgaacttgatagaag 71
Query: 444 caatggacacagagaacctgaaaacggtagcttgacggatgttttactcagggaaaaggc 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 caatggacacagagaacctgaaaacggtagcttgacggatgttttactcagggaaaaggc 131
Query: 504 actggcattgaattcggaaagagatagagagattgaagacttctttgacacacaagattc 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 actggcattgaattcggaaagagatagagagattgaagacttctttgacacacaagattc 191
Query: 564 gttgagtttcacaagtaatacagatggagaggataatgcagggacagaactgtctatgaa 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gttgagtttcacaagtaatacagatggagaggataatgcagggacagaactgtctatgaa 251
Query: 624 attcagcagtcctggaggggagttttatgatgcttgggaagaactatcttccaaaggcac 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 attcagcagtcctggaggggagttttatgatgcttgggaagaactatcttccaaaggcac 311
Query: 684 gcctcaaaaatctactacatatgatgttgaagctgaattgcgtgaaatgaggttgagtct 743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gcctcaaaaatctactacatatgatgttgaagctgaattgcgtgaaatgaggttgagtct 371
Query: 744 attgatggagatagagaagcggaagcaagctgaagaatccctgaataacttcagaaacca 803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 attgatggagatagagaagcggaagcaagctgaagaatccctgaataacttcagaaacca 431
Query: 804 atgggagagtgttaggcaagggttatgtcaggcaggaattattttgccttc 854
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atgggagagtgttaggcaagggttatgtcaggcaggaattattttgccttc 482
>gnl|LJGI|BW599245 homologue to UniRef100_A8TSW4 Cluster: Asp/Glu racemase; n=1; alpha
proteobacterium BAL199|Rep: Asp/Glu racemase - alpha,
partial (4%)
Length = 474
Score = 123 bits (62), Expect = 3e-27
Identities = 144/166 (86%), Gaps = 4/166 (2%)
Strand = Plus / Plus
Query: 1103 agatggcacggcgggagaggcaaagaaaaagtaggagacaaagatggatttggggctccc 1162
|||||||||||| ||||||||||| | || || || || || |||| ||||||||||||
Sbjct: 34 agatggcacggcaggagaggcaaaaagtaactacgatactaatatgggtttggggctccc 93
Query: 1163 ttacgactgtgattgcacttagtactgcagcaat-agcatggt-cttatctcccaacagg 1220
||||||||| |||||||||| || |||| | | |||||||| ||||||||||||||||
Sbjct: 94 ttacgactgcgattgcacttcgtgctgctccgagcagcatggtacttatctcccaacagg 153
Query: 1221 taacg-gatcatcctctgcagacgatcatc-tggttcccgaacatg 1264
|||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 154 taactcgatcatcctctgcagacgatcatcttggttcccgaacatg 199
>gnl|LJGI|TC70929 similar to UniRef100_O82090 Cluster: Fiber annexin; n=1; Gossypium
hirsutum|Rep: Fiber annexin - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (35%)
Length = 981
Score = 56.0 bits (28), Expect = 6e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 923 tttatgttgctaggttcatatcaaatattgtcgggagaggaactgtcagggctgaggtag 982
||||||||||||||||||||| |||| | | |||||||||| |||||| || ||| |||
Sbjct: 639 tttatgttgctaggttcatatgaaatcctattgggagaggaaatgtcagagccgagatag 698
Query: 983 agaaggagatggaagc 998
||| ||| |||||||
Sbjct: 699 agagggaattggaagc 714
>gnl|LJGI|AV408579
Length = 405
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1 atgccgacttttactgccatagcattggataccttgttagagcctgg 47
|||||||| ||||||||||||||||| |||| ||| ||||||||||
Sbjct: 206 atgccgacctttactgccatagcatttgataggttgatagagcctgg 252