Miyakogusa Predicted Gene

Lj2g3v1728930.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1728930.1 tr|B9HFC0|B9HFC0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_802970 PE=4
SV=1,63.77,5e-19,Methyltransf_29,Putative
S-adenosyl-L-methionine-dependent methyltransferase; SUBFAMILY NOT
NAMED,NU,CUFF.37742.1
         (295 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP028259 similar to UniRef100_A7QE39 Cluster: Chromosom...   418   e-117
gnl|LJGI|TC60570 similar to UniRef100_A7QE38 Cluster: Chromosome...   133   7e-31

>gnl|LJGI|BP028259 similar to UniRef100_A7QE39 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 488

 Score =  418 bits (211), Expect = e-117
 Identities = 211/211 (100%)
 Strand = Plus / Minus

                                                                       
Query: 85  aggtgtaaacttattcctgttatggcagaggtggatagaataatcagacctggaggtacg 144
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 aggtgtaaacttattcctgttatggcagaggtggatagaataatcagacctggaggtacg 406

                                                                       
Query: 145 ttgattgtgcgtgatgaaccgaacaccatcaaagaagtggaagctctgttaaaatctcta 204
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ttgattgtgcgtgatgaaccgaacaccatcaaagaagtggaagctctgttaaaatctcta 346

                                                                       
Query: 205 cactgggaaataacttacacaaaagaacaagaaggcatgctctgtgccaagagaggcact 264
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cactgggaaataacttacacaaaagaacaagaaggcatgctctgtgccaagagaggcact 286

                                          
Query: 265 tggcgacctgactctgcagctttgtcctgat 295
           |||||||||||||||||||||||||||||||
Sbjct: 285 tggcgacctgactctgcagctttgtcctgat 255


>gnl|LJGI|TC60570 similar to UniRef100_A7QE38 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (81%)
          Length = 768

 Score =  133 bits (67), Expect = 7e-31
 Identities = 67/67 (100%)
 Strand = Plus / Minus

                                                                       
Query: 229 gaacaagaaggcatgctctgtgccaagagaggcacttggcgacctgactctgcagctttg 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 gaacaagaaggcatgctctgtgccaagagaggcacttggcgacctgactctgcagctttg 709

                  
Query: 289 tcctgat 295
           |||||||
Sbjct: 708 tcctgat 702