Miyakogusa Predicted Gene
- Lj2g3v1728900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1728900.1 tr|G7KGA2|G7KGA2_MEDTR Short internode related
sequence OS=Medicago truncatula GN=MTR_5g021130 PE=4
,57.64,0,seg,NULL; DUF702,Protein of unknown function DUF702; FAMILY
NOT NAMED,NULL; put_zinc_LRP1: putative ,CUFF.37739.1
(966 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS350628 similar to UniRef100_A7QE40 Cluster: Chromosom... 595 e-169
gnl|LJGI|DC593299 UniRef100_Q6Y3H7 Cluster: Long flagella; n=1; ... 52 7e-06
gnl|LJGI|BP038355 weakly similar to UniRef100_A4JW39 Cluster: Tr... 52 7e-06
>gnl|LJGI|FS350628 similar to UniRef100_A7QE40 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 508
Score = 595 bits (300), Expect = e-169
Identities = 303/304 (99%)
Strand = Plus / Minus
Query: 663 ggttagctccgtggatgaggcggatgaggagtacgcttactcaacggctgtcaacattgg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ggttagctccgtggatgaggcggatgaggagtacgcttactcaacggctgtcaacattgg 449
Query: 723 aggccatgtcttcagaggaattctctatgaccatgggccagacggcaatagttacacggc 782
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 448 aggccatgtcttcagaggaattctttatgaccatgggccagacggcaatagttacacggc 389
Query: 783 tgccggagctgggagcagctcctccaccggtggtggggtggttcagccattgaaccttat 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgccggagctgggagcagctcctccaccggtggtggggtggttcagccattgaaccttat 329
Query: 843 ttcagctgccgggaacaccactgctgttggggcaattgtcgatccttcttccttgtatcc 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttcagctgccgggaacaccactgctgttggggcaattgtcgatccttcttccttgtatcc 269
Query: 903 ggctccccttaacgcattcatgcctgctagtggtacgcaattcttcccccacccaagacc 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ggctccccttaacgcattcatgcctgctagtggtacgcaattcttcccccacccaagacc 209
Query: 963 ttga 966
||||
Sbjct: 208 ttga 205
>gnl|LJGI|DC593299 UniRef100_Q6Y3H7 Cluster: Long flagella; n=1; Chlamydomonas
reinhardtii|Rep: Long flagella - Chlamydomonas, partial
(0%)
Length = 535
Score = 52.0 bits (26), Expect = 7e-06
Identities = 78/95 (82%), Gaps = 4/95 (4%)
Strand = Plus / Minus
Query: 762 agacggcaatagttacacggctgccggagctgggagcagctcctccaccggtggtg---- 817
|||| |||||| || ||||||||| || || ||| ||||||||||||| ||||||
Sbjct: 270 agactgcaataatttcacggctgctggcgccaggaacagctcctccacctgtggtgcgct 211
Query: 818 gggtggttcagccattgaaccttatttcagctgcc 852
||| |||||| || |||||||| ||||||||||||
Sbjct: 210 gggcggttcaacccttgaacctcatttcagctgcc 176
>gnl|LJGI|BP038355 weakly similar to UniRef100_A4JW39 Cluster: Transposase
IS116/IS110/IS902 family protein; n=1; Burkholderia
vietnamiensis G4|Rep: Transposase IS116/IS110/IS902
family protein - Burkholderia vietnamiensis (strain G4 /
LMG 22486) (Burkholderiacepacia (strain R1808)), partial
(4%)
Length = 549
Score = 52.0 bits (26), Expect = 7e-06
Identities = 78/95 (82%), Gaps = 4/95 (4%)
Strand = Plus / Minus
Query: 762 agacggcaatagttacacggctgccggagctgggagcagctcctccaccggtggtg---- 817
|||| |||||| || ||||||||| || || ||| ||||||||||||| ||||||
Sbjct: 403 agactgcaataatttcacggctgctggcgccaggaacagctcctccacctgtggtgcgct 344
Query: 818 gggtggttcagccattgaaccttatttcagctgcc 852
||| |||||| || |||||||| ||||||||||||
Sbjct: 343 gggcggttcaacccttgaacctcatttcagctgcc 309