Miyakogusa Predicted Gene
- Lj2g3v1728760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1728760.1 CUFF.37726.1
(2013 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68171 similar to UniRef100_Q8H0V1 Cluster: CDK5RAP1-l... 1443 0.0
gnl|LJGI|FS346832 similar to UniRef100_A7QE53 Cluster: Chromosom... 543 e-153
>gnl|LJGI|TC68171 similar to UniRef100_Q8H0V1 Cluster: CDK5RAP1-like protein; n=1;
Arabidopsis thaliana|Rep: CDK5RAP1-like protein -
Arabidopsis thaliana (Mouse-ear cress), partial (15%)
Length = 733
Score = 1443 bits (728), Expect = 0.0
Identities = 731/732 (99%)
Strand = Plus / Plus
Query: 35 gagaaccttttgtgttggggcgtcttgttgttgtgaccgctcagaccggaccctatccac 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gagaaccttttgtgttggggcgtcttgttgttgtgaccgctcagaccggaccctatccac 61
Query: 95 ctccaccaccactatcactatgtgagcgtttctgtttgcgtctcagttcaattccgataa 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctccaccaccactatcactatgtgagcgtttctgtttgcgtctcagttcaattccgataa 121
Query: 155 tggcatcgtcactgtcctccatcatcaaccaacctcacactgctctcaagcttcaccctc 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tggcatcgtcactgtcctccatcatcaaccaacctcacactgctctcaagcttcaccctc 181
Query: 215 catcttgtttcaccaccactctcagaatcttctaccaccaacacaaattcaaacacagca 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catcttgtttcaccaccactctcagaatcttctaccaccaacacaaattcaaacacagca 241
Query: 275 cttcttctcttccacgcacatatggctatcgcgcctccacttcaccgccgcgccctctca 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cttcttctcttccacgcacatatggctatcgcgcctccacttcaccgccgcgccctctca 301
Query: 335 atctcatcaccgcctccacaaccttccctcgttccaccaaattcgagggccccactctcc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 atctcatcaccgcctccacaaccttccctcgttccaccaaattcgagggccccactctcc 361
Query: 395 gccgctgcttcatcgctcaagccactctcgccgctacccaacaaccccaacaagaccttg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gccgctgcttcatcgctcaagccactctcgccgctacccaacaaccccaacaagaccttg 421
Query: 455 tactggatactgaagttccttcaaccggtcgtgtatatcatgagacttatggatgtcaaa 514
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tactggatactgaagttccgtcaaccggtcgtgtatatcatgagacttatggatgtcaaa 481
Query: 515 tgaatgttaatgacatggagattgtcctgtctataatgaaaaacgctggctataatgaag 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tgaatgttaatgacatggagattgtcctgtctataatgaaaaacgctggctataatgaag 541
Query: 575 ttgtgagtgctcctgagagtgcagaaataatatttatcaacacttgtgccatcagagaga 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttgtgagtgctcctgagagtgcagaaataatatttatcaacacttgtgccatcagagaga 601
Query: 635 atgcggaacttaaagtatggcagaggcttaattacttttggtttcttaagaggaattgga 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 atgcggaacttaaagtatggcagaggcttaattacttttggtttcttaagaggaattgga 661
Query: 695 aggccaatgttgcttcgggaagggctcagtccctgcaccctccgaaagtagttgtcttgg 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 aggccaatgttgcttcgggaagggctcagtccctgcaccctccgaaagtagttgtcttgg 721
Query: 755 gctgtatggctg 766
||||||||||||
Sbjct: 722 gctgtatggctg 733
>gnl|LJGI|FS346832 similar to UniRef100_A7QE53 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 674
Score = 543 bits (274), Expect = e-153
Identities = 274/274 (100%)
Strand = Plus / Minus
Query: 1740 gcttgtgttagttgaaggacccaataagagagctccggacaccgagcttatgggcaaaag 1799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 gcttgtgttagttgaaggacccaataagagagctccggacaccgagcttatgggcaaaag 615
Query: 1800 tgacaagggccatcgggtgctatttgccaatgtgccgatcccagacagggacgatgttaa 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tgacaagggccatcgggtgctatttgccaatgtgccgatcccagacagggacgatgttaa 555
Query: 1860 tacaatgagaaatcctgttgttggtgatttcgttgaagtccgcataatgagatctactag 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tacaatgagaaatcctgttgttggtgatttcgttgaagtccgcataatgagatctactag 495
Query: 1920 ggcatcactcttcggtgaatcacttgctataactaaactgagttcattctacaatgatct 1979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ggcatcactcttcggtgaatcacttgctataactaaactgagttcattctacaatgatct 435
Query: 1980 agataaagaagctgttgcatgcaacatataaaac 2013
||||||||||||||||||||||||||||||||||
Sbjct: 434 agataaagaagctgttgcatgcaacatataaaac 401