Miyakogusa Predicted Gene

Lj2g3v1728750.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1728750.1 Non Chatacterized Hit- tr|I1J8P6|I1J8P6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1927
PE=,89.73,0,SUBFAMILY NOT NAMED,NULL; D-LACTATE DEHYDROGENASE,NULL;
FAD_PCMH,FAD-binding, type 2; FAD-binding do,CUFF.37725.1
         (1677 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77319 weakly similar to UniRef100_O23240 Cluster: Act...   839   0.0  
gnl|LJGI|AV769183 similar to UniRef100_A7QE54 Cluster: Chromosom...   595   e-169
gnl|LJGI|AW719232 similar to UniRef100_A7QE54 Cluster: Chromosom...   367   e-100

>gnl|LJGI|TC77319 weakly similar to UniRef100_O23240 Cluster: Actin interacting
           protein; n=1; Arabidopsis thaliana|Rep: Actin
           interacting protein - Arabidopsis thaliana (Mouse-ear
           cress), partial (12%)
          Length = 494

 Score =  839 bits (423), Expect = 0.0
 Identities = 437/444 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgaatcggaacaccagagccacacttcgcttactcaccccattcttcaatccccga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  atgatgaatcggaacaccagagccacacttcgcttactcaccccattcttcaatccccga 110

                                                                       
Query: 61  cgcaacccatctcttctcccttcaacacctcatttcgatgaaaactggtggcactcacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cgcaacccatctcttctcccttcaacacctcatttcgatgaaaactggtggcactcacag 170

                                                                       
Query: 121 accaacattgcccacggggagcatagagtttcttcactcttcaacccgttaagattttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 accaacattgcccacggggagcatagagtttcttcactcttcaacccgttaagattttca 230

                                                                       
Query: 181 gtgaaaaatcagcaaatgggtgttggaatttcaaccggaatccagcataaatgctatgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 gtgaaaaatcagcaaatgggtgttggaatttcaaccggaatccagcataaatgctatgct 290

                                                                       
Query: 241 tcaatgcctgggttggttcagaggaaccccagattctcagaattgaatgatgatgatgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tcaatgcctgggttggttcagaggaaccccagattctcagaattgaatgatgatgatgtt 350

                                                                       
Query: 301 agatacttccaggagatactgggtcnnnnnnntgttgtgcaggatgaggagaagctcagc 360
           |||||||||||||||||||||||||       ||||||||||||||||||||||||||||
Sbjct: 351 agatacttccaggagatactgggtcaaaaaaatgttgtgcaggatgaggagaagctcagc 410

                                                                       
Query: 361 actgtaaacactgattggatgcataagtacgaaggctctagtaagctcctgctacaacct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 actgtaaacactgattggatgcataagtacgaaggctctagtaagctcctgctacaacct 470

                                   
Query: 421 tggaacactgatcaggtttctcag 444
           ||||||||||||||||||||||||
Sbjct: 471 tggaacactgatcaggtttctcag 494


>gnl|LJGI|AV769183 similar to UniRef100_A7QE54 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 395

 Score =  595 bits (300), Expect = e-169
 Identities = 303/304 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1374 aggtaatgctgctaatgtagttggatatggtcaccttggagatggtaatttgcatttaaa 1433
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 395  aggtaatgctgctaatgtagttggatatggtcaccttgcagatggtaatttgcatttaaa 336

                                                                        
Query: 1434 tatttctgtgcctcagtatgatgacaagattttatcgcaaattgagcctttcgtgtacga 1493
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335  tatttctgtgcctcagtatgatgacaagattttatcgcaaattgagcctttcgtgtacga 276

                                                                        
Query: 1494 atggacatctaaacacaatggcagtattagcgcagagcatggcctgggattaatgaaagc 1553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275  atggacatctaaacacaatggcagtattagcgcagagcatggcctgggattaatgaaagc 216

                                                                        
Query: 1554 taacgagattttgtatagcaagtcactggaaactgtgcaactaatggcttccatcaagaa 1613
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215  taacgagattttgtatagcaagtcactggaaactgtgcaactaatggcttccatcaagaa 156

                                                                        
Query: 1614 tttgctggatcccaatcacatactcaacccatataaagttcttcctcactctctcattgc 1673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155  tttgctggatcccaatcacatactcaacccatataaagttcttcctcactctctcattgc 96

                
Query: 1674 ataa 1677
            ||||
Sbjct: 95   ataa 92


>gnl|LJGI|AW719232 similar to UniRef100_A7QE54 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (11%)
          Length = 440

 Score =  367 bits (185), Expect = e-100
 Identities = 194/197 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1481 ctttcgtgtacgaatggacatctaaacacaatggcagtattagcgcagagcatggcctgg 1540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ctttcgtgtacgaatggacatctaaacacaatggcagtattagcgcagagcatggcctgg 60

                                                                        
Query: 1541 gattaatgaaagctaacgagattttgtatagcaagtcactggaaactgtgcaactaatgg 1600
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61   gattaatgaaagctaacgagattttgtatagcaagtcactggaaacggtgcaactaatgg 120

                                                                        
Query: 1601 cttccatcaagaatttgctggatcccaatcacatactcaacccatataaagttcttcctc 1660
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  cttccatcaagagtttgctggatcccaatcacatactcaacccatataaagttcttcctc 180

                             
Query: 1661 actctctcattgcataa 1677
            ||||||||| |||||||
Sbjct: 181  actctctcaatgcataa 197