Miyakogusa Predicted Gene
- Lj2g3v1707580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1707580.1 tr|G7KGE9|G7KGE9_MEDTR Kinesin-related protein
OS=Medicago truncatula GN=MTR_5g021650 PE=3 SV=1,70.15,0,P-loop
containing nucleoside triphosphate hydrolases,NULL;
KINESIN_MOTOR_DOMAIN2,Kinesin, motor doma,CUFF.37714.1
(2172 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS349603 UniRef100_UPI00004D6DFC Cluster: Probable E3 u... 521 e-147
gnl|LJGI|TC67195 similar to UniRef100_A7QE14 Cluster: Chromosome... 149 9e-35
gnl|LJGI|BW594464 weakly similar to UniRef100_A7QE14 Cluster: Ch... 133 5e-30
gnl|LJGI|TC66660 homologue to UniRef100_A5JJV0 Cluster: Mitochon... 78 3e-13
gnl|LJGI|TC75555 weakly similar to UniRef100_UPI0000196FBC Clust... 68 3e-10
>gnl|LJGI|FS349603 UniRef100_UPI00004D6DFC Cluster: Probable E3 ubiquitin-protein ligase
HERC2 (EC 6.3.2.-), partial (0%)
Length = 271
Score = 521 bits (263), Expect = e-147
Identities = 269/271 (99%)
Strand = Plus / Minus
Query: 1738 gtcgatgtccagaatgtaaaatcctccaccgacaaggaaagtgagagtaatggttcatta 1797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 gtcgatgtccagaatgtaaaatcctccaccgacaaggaaagtgagagtaatggttcatta 212
Query: 1798 actccacaaggaaaggagacagaaaatctcaagagtttgaatttacttgctgaccatgag 1857
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 actccccaaggaaaggagacagaaaatctcaagagtttgaatttacttgctgaccatgag 152
Query: 1858 gttccggggacaggactggatccctccatgtctacaaagaatttcaaagatgttggcttg 1917
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 151 gttccggggacaggactggatccctccatgtttacaaagaatttcaaagatgttggcttg 92
Query: 1918 gacccaatgcaagctgacaattcagactggccttcaaaatttaaggatctgcaaaaagag 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gacccaatgcaagctgacaattcagactggccttcaaaatttaaggatctgcaaaaagag 32
Query: 1978 attgttgaactctgggatgcttgcaatgttt 2008
|||||||||||||||||||||||||||||||
Sbjct: 31 attgttgaactctgggatgcttgcaatgttt 1
>gnl|LJGI|TC67195 similar to UniRef100_A7QE14 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 735
Score = 149 bits (75), Expect = 9e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 atgagtggtgtaactgaatgcactgcagcagacatttttaactacatagaaaagcacgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atgagtggtgtaactgaatgcactgcagcagacatttttaactacatagaaaagcacgtg 720
Query: 61 gaaagagaattcact 75
|||||||||||||||
Sbjct: 721 gaaagagaattcact 735
>gnl|LJGI|BW594464 weakly similar to UniRef100_A7QE14 Cluster: Chromosome chr4
scaffold_83, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_83, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 485
Score = 133 bits (67), Expect = 5e-30
Identities = 85/91 (93%)
Strand = Plus / Plus
Query: 1884 catgtctacaaagaatttcaaagatgttggcttggacccaatgcaagctgacaattcaga 1943
||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||||| |
Sbjct: 16 catgtctccaaagaatgtcaaagattttggcttggactcaatgcaagctgacaattcaaa 75
Query: 1944 ctggccttcaaaatttaaggatctgcaaaaa 1974
||||||||||| |||||||||||||||||||
Sbjct: 76 ctggccttcaagatttaaggatctgcaaaaa 106
Score = 103 bits (52), Expect = 5e-21
Identities = 70/76 (92%)
Strand = Plus / Plus
Query: 2063 ctatttatatggaggtagagctgagaaggctatcatatcttaaccaaactttctcacaag 2122
|||||||||||||||||||| || |||| ||||||||||||||||||||||||| |||||
Sbjct: 144 ctatttatatggaggtagagttgggaagactatcatatcttaaccaaactttctgacaag 203
Query: 2123 gcaataagaccgtgga 2138
|||| ||||||||||
Sbjct: 204 acaattagaccgtgga 219
>gnl|LJGI|TC66660 homologue to UniRef100_A5JJV0 Cluster: Mitochondrial
dihydroorotase; n=1; Vicia faba|Rep: Mitochondrial
dihydroorotase - Vicia faba (Broad bean), partial (21%)
Length = 1472
Score = 77.8 bits (39), Expect = 3e-13
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 514 ggaagaaatggacatgttcctttcagagattcaaagctaacccgcatattgcagtcgtca 573
||||||||| ||||||||||||| ||||||| ||||||||| | |||||||||| ||||
Sbjct: 702 ggaagaaatacacatgttcctttcggagattcgaagctaacctgtatattgcagttgtca 761
Query: 574 ttaggag 580
|||||||
Sbjct: 762 ttaggag 768
>gnl|LJGI|TC75555 weakly similar to UniRef100_UPI0000196FBC Cluster: kinesin motor
family protein; n=1; Arabidopsis thaliana|Rep: kinesin
motor family protein - Arabidopsis thaliana, partial
(11%)
Length = 653
Score = 67.9 bits (34), Expect = 3e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2135 tggaagatggacgaaccctgacccctgagtcaag 2168
||||||||||||||||||||||||||||||||||
Sbjct: 1 tggaagatggacgaaccctgacccctgagtcaag 34