Miyakogusa Predicted Gene
- Lj2g3v1695200.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1695200.1 Non Chatacterized Hit- tr|H9V2B0|H9V2B0_PINTA
Uncharacterized protein (Fragment) OS=Pinus taeda
GN=0,64.18,0.0000000000002,FAMILY NOT NAMED,NULL; ARM
repeat,Armadillo-type fold; no description,Armadillo-like helical;
seg,NU,NODE_29960_length_1288_cov_94.891304.path1.1
(963 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60584 similar to UniRef100_A7QDX4 Cluster: Chromosome... 1768 0.0
gnl|LJGI|TC74582 weakly similar to UniRef100_A7P891 Cluster: Chr... 220 1e-56
gnl|LJGI|TC82061 similar to UniRef100_A7QDX4 Cluster: Chromosome... 180 1e-44
>gnl|LJGI|TC60584 similar to UniRef100_A7QDX4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1123
Score = 1768 bits (892), Expect = 0.0
Identities = 892/892 (100%)
Strand = Plus / Plus
Query: 72 agccaatggaattggtaatgatgggaagcaaggaaatcaacccctccatcataatcagaa 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agccaatggaattggtaatgatgggaagcaaggaaatcaacccctccatcataatcagaa 62
Query: 132 tcagactaatcatcagcgtaactattcgcattcggggattaacatgaagggaagggataa 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 tcagactaatcatcagcgtaactattcgcattcggggattaacatgaagggaagggataa 122
Query: 192 tgaagaccctgagacaaaggctagcatgaaggaaatggcagcaagggcactctggcactt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tgaagaccctgagacaaaggctagcatgaaggaaatggcagcaagggcactctggcactt 182
Query: 252 ggctaagggtaatgtcccgatttgtcgtagcatcacggaatcgagagctttgttgtgctt 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggctaagggtaatgtcccgatttgtcgtagcatcacggaatcgagagctttgttgtgctt 242
Query: 312 tgctgttctccttgagaaaggagaggagaaggtgcagtacaattcggccatggcggtgat 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tgctgttctccttgagaaaggagaggagaaggtgcagtacaattcggccatggcggtgat 302
Query: 372 ggagatcactgctgtggctgagaaagatgctgatttgagaaagtctgcattcaagccaaa 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggagatcactgctgtggctgagaaagatgctgatttgagaaagtctgcattcaagccaaa 362
Query: 432 ctcccctgcctgcaaagcggttgttgatcaattgcttaagataattgagaaggcagattc 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ctcccctgcctgcaaagcggttgttgatcaattgcttaagataattgagaaggcagattc 422
Query: 492 agatctcctcattccttgtgtcagtgctattgggaatttggcaaggacttttcgtgccac 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agatctcctcattccttgtgtcagtgctattgggaatttggcaaggacttttcgtgccac 482
Query: 552 ggagacgaggatgatcggtcccttggtgcggcttcttgatgaaagagaggcagaggtata 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggagacgaggatgatcggtcccttggtgcggcttcttgatgaaagagaggcagaggtata 542
Query: 612 cagggaggcgtccatcgccctcacgaaattcgcctgcactgataactaccttcaccttga 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cagggaggcgtccatcgccctcacgaaattcgcctgcactgataactaccttcaccttga 602
Query: 672 tcactccaaggcgattataaccgcaggcggggctaaacacttgattcagcttgtgtattt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tcactccaaggcgattataaccgcaggcggggctaaacacttgattcagcttgtgtattt 662
Query: 732 cggagaacagatggttcagattcctgcattagttctgctctcctacattgcgctgcacgt 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cggagaacagatggttcagattcctgcattagttctgctctcctacattgcgctgcacgt 722
Query: 792 cccggacagcgaagagcttgctcaggatgaggtgttgggagtgcttgaatgggcatcaaa 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 cccggacagcgaagagcttgctcaggatgaggtgttgggagtgcttgaatgggcatcaaa 782
Query: 852 gcaatcttccatgacacatgatgaaacccttgaggctttgctgcaagaatccaagagtag 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 gcaatcttccatgacacatgatgaaacccttgaggctttgctgcaagaatccaagagtag 842
Query: 912 attggagctttaccagtccagaggctcaagattccataaattacaccaatag 963
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 attggagctttaccagtccagaggctcaagattccataaattacaccaatag 894
>gnl|LJGI|TC74582 weakly similar to UniRef100_A7P891 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 544
Score = 220 bits (111), Expect = 1e-56
Identities = 306/371 (82%)
Strand = Plus / Plus
Query: 565 atcggtcccttggtgcggcttcttgatgaaagagaggcagaggtatacagggaggcgtcc 624
|||||||||||| | |||||||| |||||||||||| ||||| | || ||||| |
Sbjct: 5 atcggtcccttgcttcggcttctggatgaaagagagccagagttgacaagagaggctaca 64
Query: 625 atcgccctcacgaaattcgcctgcactgataactaccttcaccttgatcactccaaggcg 684
||| |||||| ||||||||||||||| || |||||||| |||||||||||||||||||||
Sbjct: 65 atctccctcatgaaattcgcctgcaccgagaactacctccaccttgatcactccaaggcg 124
Query: 685 attataaccgcaggcggggctaaacacttgattcagcttgtgtatttcggagaacagatg 744
|||||||| ||||| || ||||||||| || | ||||| |||||| | ||||| || |
Sbjct: 125 attataactgcaggtggtgctaaacacctggtccagctggtgtatcttggagagcacaca 184
Query: 745 gttcagattcctgcattagttctgctctcctacattgcgctgcacgtcccggacagcgaa 804
||||| |||| ||||| |||| ||||| |||||||| ||||| || | ||||| ||
Sbjct: 185 gttcaagttccagcattgtttcttctctcgtacattgctctgcatgttgctgacagtgag 244
Query: 805 gagcttgctcaggatgaggtgttgggagtgcttgaatgggcatcaaagcaatcttccatg 864
|||||||||| || ||||||| | | |||||||||||||||||| ||| | || ||||
Sbjct: 245 gagcttgctcgggctgaggtgctcgcagtgcttgaatgggcatccaagagacctaacatg 304
Query: 865 acacatgatgaaacccttgaggctttgctgcaagaatccaagagtagattggagctttac 924
|| || |||||||| |||||||| ||| |||| || ||||||||||| ||||||||||||
Sbjct: 305 acccaagatgaaacgcttgaggcattgttgcatgagtccaagagtaggttggagctttac 364
Query: 925 cagtccagagg 935
||||| |||||
Sbjct: 365 cagtctagagg 375
>gnl|LJGI|TC82061 similar to UniRef100_A7QDX4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 719
Score = 180 bits (91), Expect = 1e-44
Identities = 263/315 (83%), Gaps = 4/315 (1%)
Strand = Plus / Plus
Query: 161 attcggggattaacatgaagggaagggataatgaagaccctgagacaaaggctagcatga 220
|||| ||||||||||||||||||||||| ||||||||||||| ||||||| ||||
Sbjct: 379 attctgggattaacatgaagggaagggagcttgaagaccctgaggttaaggctaagatga 438
Query: 221 aggaaatggcagcaagggcactctggcacttggctaagggtaa-tgtcccgatttgtcgt 279
| | ||||||||||||||| | ||| || || |||||||| | | || ||||||||
Sbjct: 439 aagcaatggcagcaagggccttgtggtgtttagccaagggtaactcttcc-atttgtcgc 497
Query: 280 agcatcacggaatcgagagctttgttgtgctttgctgttctccttgagaaaggagaggag 339
||||| ||||||||||| |||||||||||| |||| |||||||||||||||| | ||
Sbjct: 498 agcataacggaatcgagggctttgttgtgccttgccattctccttgagaaagg-gtctag 556
Query: 340 a-aggtgcagtacaattcggccatggcggtgatggagatcactgctgtggctgagaaaga 398
| | || |||||||||| |||||||| |||||||||||||||| ||||||||||||||
Sbjct: 557 agatgtcaagtacaattcagccatggcagtgatggagatcactgaagtggctgagaaaga 616
Query: 399 tgctgatttgagaaagtctgcattcaagccaaactcccctgcctgcaaagcggttgttga 458
| |||| ||||||| || ||||||||||| ||||| ||||| |||||||| ||||||||
Sbjct: 617 tcctgagttgagaagatcagcattcaagcccaactctcctgcttgcaaagcagttgttga 676
Query: 459 tcaattgcttaagat 473
|||| |||| |||||
Sbjct: 677 tcaagtgctcaagat 691