Miyakogusa Predicted Gene
- Lj2g3v1691070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1691070.1 tr|B9NAQ8|B9NAQ8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_787432 PE=4
SV=1,42.64,7e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Senescence,Senescence/spartin-associated,CUFF.37657.1
(690 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66560 similar to UniRef100_A7P8A4 Cluster: Chromosome... 789 0.0
gnl|LJGI|TC59157 similar to UniRef100_Q94II1 Cluster: ERD7 prote... 216 1e-55
gnl|LJGI|TC77513 similar to UniRef100_A7QDV5 Cluster: Chromosome... 111 6e-24
>gnl|LJGI|TC66560 similar to UniRef100_A7P8A4 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 711
Score = 789 bits (398), Expect = 0.0
Identities = 401/402 (99%)
Strand = Plus / Plus
Query: 289 ggggtcgtgaaagtgtctggattctttaccagttcactggtaaattccaaagtcggaaag 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggtcgtgaaagtgtctggattctttaccagttcactggtaaattccaaagtcggaaag 60
Query: 349 aaatttttcagccttctaccaggggaagttgtgcttgcatcattggatggattcagtaaa 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaatttttcagccttctaccaggggaagttgtgcttgcatcattggatggattcagtaaa 120
Query: 409 gtgtgtgatgctgttgaagtagctggaaaaaatgtcatgtcaacgtcatccactgtgaca 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgtgtgatgctgttgaagtagctggaaaaaatgtcatgtcaacgtcatccactgtgaca 180
Query: 469 actgagcttgtcgaccacagatatggggagcaagctgctgaagcaacaagtgaagggctt 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actgagcttgtcgaccacagatatggggagcaagctgctgaagcaacaagtgaagggctt 240
Query: 529 aatgctgctggtcatgctctgggtactgcatgggctgcgtttaagatcaggaaggctatt 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatgctgctggtcatgctctgggtactgcatgggctgcgtttaagatcaggaaggctatt 300
Query: 589 aaccctaagagtgtttttaaacccaccacactggccaagtctggtgctaaagctgcagct 648
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 301 aaccctaagagtgtttttaaacccaccacactggcccagtctggtgctaaagctgcagct 360
Query: 649 aaagctgcagcttctgatttgaagtctaaaaagtccaagtga 690
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaagctgcagcttctgatttgaagtctaaaaagtccaagtga 402
>gnl|LJGI|TC59157 similar to UniRef100_Q94II1 Cluster: ERD7 protein; n=1; Arabidopsis
thaliana|Rep: ERD7 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (32%)
Length = 811
Score = 216 bits (109), Expect = 1e-55
Identities = 109/109 (100%)
Strand = Plus / Plus
Query: 1 atgatggaggagcggagtgctgcgtattggactacgctggctccgaatgtggaggattat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 atgatggaggagcggagtgctgcgtattggactacgctggctccgaatgtggaggattat 762
Query: 61 agtagtactactgcgaggatgattgctgcagggtctggtcatgtggtta 109
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 agtagtactactgcgaggatgattgctgcagggtctggtcatgtggtta 811
>gnl|LJGI|TC77513 similar to UniRef100_A7QDV5 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 1438
Score = 111 bits (56), Expect = 6e-24
Identities = 146/176 (82%)
Strand = Plus / Plus
Query: 283 ctctctggggtcgtgaaagtgtctggattctttaccagttcactggtaaattccaaagtc 342
||||| ||||| ||||| |||||||||||||| || |||||| | || || || |||
Sbjct: 892 ctctcaggggttgtgaaggtgtctggattcttcactagttcagtagtcaactctaaaccg 951
Query: 343 ggaaagaaatttttcagccttctaccaggggaagttgtgcttgcatcattggatggattc 402
||||||||||| ||||||||||| || || ||| |||| ||||| || |||||||||||
Sbjct: 952 ggaaagaaattcttcagccttcttcccggagaaattgttcttgcttccatggatggattc 1011
Query: 403 agtaaagtgtgtgatgctgttgaagtagctggaaaaaatgtcatgtcaacgtcatc 458
| ||| || ||||||||||| ||||||||||||| ||||||||||| || |||||
Sbjct: 1012 aataaggtctgtgatgctgtagaagtagctggaaggaatgtcatgtctacttcatc 1067
Score = 56.0 bits (28), Expect = 3e-07
Identities = 112/140 (80%)
Strand = Plus / Plus
Query: 22 gcgtattggactacgctggctccgaatgtggaggattatagtagtactactgcgaggatg 81
||||||||||| ||| ||||||| || ||||||||||| || || | |||||| |
Sbjct: 628 gcgtattggaccacgttggctccaaacgtggaggattacagcagccgtttcgcgaggtgg 687
Query: 82 attgctgcagggtctggtcatgtggttaaggggattttgtggtgtggagatgtgacggtg 141
|| ||| | ||||| ||||| |||| | ||||||| | |||||||| ||||| || |||
Sbjct: 688 atagcttctgggtcgggtcagatggtgagggggattctctggtgtggggatgttactgtg 747
Query: 142 gataggttgaactgggggaa 161
||||||||||| ||||||||
Sbjct: 748 gataggttgaaatgggggaa 767