Miyakogusa Predicted Gene

Lj2g3v1681040.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1681040.2 Non Chatacterized Hit- tr|I1J8J8|I1J8J8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.64,0,His Kinase A
(phosphoacceptor) domain,Signal transduction histidine kinase,
subgroup 1, dimerisation,CUFF.37688.2
         (3018 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76342 similar to UniRef100_A7QDV4 Cluster: Chromosome...  1116   0.0  
gnl|LJGI|BP055416 similar to UniRef100_A7QDV4 Cluster: Chromosom...   226   6e-58
gnl|LJGI|TC81868 similar to UniRef100_A7QDV4 Cluster: Chromosome...   204   2e-51

>gnl|LJGI|TC76342 similar to UniRef100_A7QDV4 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (13%)
          Length = 834

 Score = 1116 bits (563), Expect = 0.0
 Identities = 572/575 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2444 tgtctagtaaagcaccatcctctccaacagcagcacaagatggagattctgaatgtgggg 2503
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3    tgtctagtaaagcaccatcctctcccacagcagcacaagatggagattctgaatgtgggg 62

                                                                        
Query: 2504 aaacaaatagagtcaccggctcaagtaaagcaataaatggaaagaaatctctggagggcc 2563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63   aaacaaatagagtcaccggctcaagtaaagcaataaatggaaagaaatctctggagggcc 122

                                                                        
Query: 2564 ttaggattttgcttgcagaagatacaccagtactccaaagagttgcaaccataatgcttg 2623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123  ttaggattttgcttgcagaagatacaccagtactccaaagagttgcaaccataatgcttg 182

                                                                        
Query: 2624 aaaaaatgggagctgttgttgttgctgttggtgatggacaacaggcagtagatgctctca 2683
            |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 183  aaaaaatgggagctgttgttgttgctgttggtgatggacagcaggcagtagatgctctca 242

                                                                        
Query: 2684 atatcatggtcagtgccgaagattttagaagagagtctctccagaaggaaagaaacacaa 2743
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 243  atatcatggtcagtgccgaagattttagaagagagtctctccagaaggaaagaagcacaa 302

                                                                        
Query: 2744 gatctcaaacagagattttcagttgccatccatatgacttgatcctaatggattgtcaga 2803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303  gatctcaaacagagattttcagttgccatccatatgacttgatcctaatggattgtcaga 362

                                                                        
Query: 2804 tgccgaagatggatggatacgaggcgacaaaagcaataaggaaatcagaagagggaacag 2863
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363  tgccgaagatggatggatacgaggcgacaaaagcaataaggaaatcagaagagggaacag 422

                                                                        
Query: 2864 ccctgcacattcccatagttgctcttacagctcatgcaatgtcatgtgatgaagccaagt 2923
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423  ccctgcacattcccatagttgctcttacagctcatgcaatgtcatgtgatgaagccaagt 482

                                                                        
Query: 2924 gcctgcaggtgggcatggatgcttacttaacaaagccaattgacttcaagaagatggtgt 2983
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483  gcctgcaggtgggcatggatgcttacttaacaaagccaattgacttcaagaagatggtgt 542

                                               
Query: 2984 ccaccatcatttcactcactaaaagaacatcttga 3018
            |||||||||||||||||||||||||||||||||||
Sbjct: 543  ccaccatcatttcactcactaaaagaacatcttga 577


>gnl|LJGI|BP055416 similar to UniRef100_A7QDV4 Cluster: Chromosome chr4 scaffold_83,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_83, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 500

 Score =  226 bits (114), Expect = 6e-58
 Identities = 229/267 (85%), Gaps = 3/267 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2709 tagaagagagtctctccagaaggaaagaaacacaagatc---tcaaacagagattttcag 2765
            |||||| ||||||||||  ||||||||||||| ||||||   |||||| |||||  | | 
Sbjct: 464  tagaagggagtctctcctaaaggaaagaaacataagatcatctcaaactgagatcctaaa 405

                                                                        
Query: 2766 ttgccatccatatgacttgatcctaatggattgtcagatgccgaagatggatggatacga 2825
            ||| |  |||||||||||| |||||||||||||||||||||| ||||||||||| || ||
Sbjct: 404  ttgtcccccatatgacttggtcctaatggattgtcagatgccnaagatggatggctatga 345

                                                                        
Query: 2826 ggcgacaaaagcaataaggaaatcagaagagggaacagccctgcacattcccatagttgc 2885
            ||| ||||||| ||| || |||||||||| |||||| |   ||||||||||||| |||||
Sbjct: 344  ggcaacaaaagaaatcagaaaatcagaagtgggaactggattgcacattcccattgttgc 285

                                                                        
Query: 2886 tcttacagctcatgcaatgtcatgtgatgaagccaagtgcctgcaggtgggcatggatgc 2945
            |||||||||||||||||||||||||||||||||||| ||  ||  |||||| ||||||||
Sbjct: 284  tcttacagctcatgcaatgtcatgtgatgaagccaaatgtttgggggtgggtatggatgc 225

                                       
Query: 2946 ttacttaacaaagccaattgacttcaa 2972
            ||| || |||||||| |||||||||||
Sbjct: 224  ttatttgacaaagcccattgacttcaa 198


>gnl|LJGI|TC81868 similar to UniRef100_A7QDV4 Cluster: Chromosome chr4 scaffold_83,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_83, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 730

 Score =  204 bits (103), Expect = 2e-51
 Identities = 130/139 (93%)
 Strand = Plus / Plus

                                                                       
Query: 746 gatgtgtttgcattttgatattgacaaacggagtgtcaaaggaaatgaatctaagagcag 805
           |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| 
Sbjct: 592 gatgtgtttgcattttgatattgacaaacaaagtgtcaaaggaaatgaatctaagagcat 651

                                                                       
Query: 806 aattgataagtcaaatggaagcaagaaggaaagcagaggcagcaagcaactacaaaagtc 865
           ||||| |||||||| | |||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 652 aattgttaagtcaactagaagcaagaaggaaggcagagtcatcaagcaactacaaaagtc 711

                              
Query: 866 aattccttgccaacatgag 884
           |||||||||||||||||||
Sbjct: 712 aattccttgccaacatgag 730