Miyakogusa Predicted Gene
- Lj2g3v1681040.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1681040.2 Non Chatacterized Hit- tr|I1J8J8|I1J8J8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.64,0,His Kinase A
(phosphoacceptor) domain,Signal transduction histidine kinase,
subgroup 1, dimerisation,CUFF.37688.2
(3018 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76342 similar to UniRef100_A7QDV4 Cluster: Chromosome... 1116 0.0
gnl|LJGI|BP055416 similar to UniRef100_A7QDV4 Cluster: Chromosom... 226 6e-58
gnl|LJGI|TC81868 similar to UniRef100_A7QDV4 Cluster: Chromosome... 204 2e-51
>gnl|LJGI|TC76342 similar to UniRef100_A7QDV4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 834
Score = 1116 bits (563), Expect = 0.0
Identities = 572/575 (99%)
Strand = Plus / Plus
Query: 2444 tgtctagtaaagcaccatcctctccaacagcagcacaagatggagattctgaatgtgggg 2503
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3 tgtctagtaaagcaccatcctctcccacagcagcacaagatggagattctgaatgtgggg 62
Query: 2504 aaacaaatagagtcaccggctcaagtaaagcaataaatggaaagaaatctctggagggcc 2563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 aaacaaatagagtcaccggctcaagtaaagcaataaatggaaagaaatctctggagggcc 122
Query: 2564 ttaggattttgcttgcagaagatacaccagtactccaaagagttgcaaccataatgcttg 2623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ttaggattttgcttgcagaagatacaccagtactccaaagagttgcaaccataatgcttg 182
Query: 2624 aaaaaatgggagctgttgttgttgctgttggtgatggacaacaggcagtagatgctctca 2683
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 183 aaaaaatgggagctgttgttgttgctgttggtgatggacagcaggcagtagatgctctca 242
Query: 2684 atatcatggtcagtgccgaagattttagaagagagtctctccagaaggaaagaaacacaa 2743
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 243 atatcatggtcagtgccgaagattttagaagagagtctctccagaaggaaagaagcacaa 302
Query: 2744 gatctcaaacagagattttcagttgccatccatatgacttgatcctaatggattgtcaga 2803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gatctcaaacagagattttcagttgccatccatatgacttgatcctaatggattgtcaga 362
Query: 2804 tgccgaagatggatggatacgaggcgacaaaagcaataaggaaatcagaagagggaacag 2863
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgccgaagatggatggatacgaggcgacaaaagcaataaggaaatcagaagagggaacag 422
Query: 2864 ccctgcacattcccatagttgctcttacagctcatgcaatgtcatgtgatgaagccaagt 2923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ccctgcacattcccatagttgctcttacagctcatgcaatgtcatgtgatgaagccaagt 482
Query: 2924 gcctgcaggtgggcatggatgcttacttaacaaagccaattgacttcaagaagatggtgt 2983
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcctgcaggtgggcatggatgcttacttaacaaagccaattgacttcaagaagatggtgt 542
Query: 2984 ccaccatcatttcactcactaaaagaacatcttga 3018
|||||||||||||||||||||||||||||||||||
Sbjct: 543 ccaccatcatttcactcactaaaagaacatcttga 577
>gnl|LJGI|BP055416 similar to UniRef100_A7QDV4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 500
Score = 226 bits (114), Expect = 6e-58
Identities = 229/267 (85%), Gaps = 3/267 (1%)
Strand = Plus / Minus
Query: 2709 tagaagagagtctctccagaaggaaagaaacacaagatc---tcaaacagagattttcag 2765
|||||| |||||||||| ||||||||||||| |||||| |||||| ||||| | |
Sbjct: 464 tagaagggagtctctcctaaaggaaagaaacataagatcatctcaaactgagatcctaaa 405
Query: 2766 ttgccatccatatgacttgatcctaatggattgtcagatgccgaagatggatggatacga 2825
||| | |||||||||||| |||||||||||||||||||||| ||||||||||| || ||
Sbjct: 404 ttgtcccccatatgacttggtcctaatggattgtcagatgccnaagatggatggctatga 345
Query: 2826 ggcgacaaaagcaataaggaaatcagaagagggaacagccctgcacattcccatagttgc 2885
||| ||||||| ||| || |||||||||| |||||| | ||||||||||||| |||||
Sbjct: 344 ggcaacaaaagaaatcagaaaatcagaagtgggaactggattgcacattcccattgttgc 285
Query: 2886 tcttacagctcatgcaatgtcatgtgatgaagccaagtgcctgcaggtgggcatggatgc 2945
|||||||||||||||||||||||||||||||||||| || || |||||| ||||||||
Sbjct: 284 tcttacagctcatgcaatgtcatgtgatgaagccaaatgtttgggggtgggtatggatgc 225
Query: 2946 ttacttaacaaagccaattgacttcaa 2972
||| || |||||||| |||||||||||
Sbjct: 224 ttatttgacaaagcccattgacttcaa 198
>gnl|LJGI|TC81868 similar to UniRef100_A7QDV4 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 730
Score = 204 bits (103), Expect = 2e-51
Identities = 130/139 (93%)
Strand = Plus / Plus
Query: 746 gatgtgtttgcattttgatattgacaaacggagtgtcaaaggaaatgaatctaagagcag 805
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 592 gatgtgtttgcattttgatattgacaaacaaagtgtcaaaggaaatgaatctaagagcat 651
Query: 806 aattgataagtcaaatggaagcaagaaggaaagcagaggcagcaagcaactacaaaagtc 865
||||| |||||||| | |||||||||||||| |||||| || ||||||||||||||||||
Sbjct: 652 aattgttaagtcaactagaagcaagaaggaaggcagagtcatcaagcaactacaaaagtc 711
Query: 866 aattccttgccaacatgag 884
|||||||||||||||||||
Sbjct: 712 aattccttgccaacatgag 730