Miyakogusa Predicted Gene
- Lj2g3v1670980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1670980.1 Non Chatacterized Hit- tr|I1J8I8|I1J8I8_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,95.48,0,Vps35,Vacuolar protein sorting-associated protein 35;
seg,NULL; VACUOLAR SORTING PROTEIN 35,Vacuolar,CUFF.37659.1
(2193 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75236 homologue to UniRef100_A7QDT2 Cluster: Chromoso... 1187 0.0
gnl|LJGI|FS336009 homologue to UniRef100_A7QDT2 Cluster: Chromos... 952 0.0
gnl|LJGI|TC71745 similar to UniRef100_A7QDT2 Cluster: Chromosome... 543 e-153
gnl|LJGI|TC70642 similar to UniRef100_A7NSS5 Cluster: Chromosome... 172 6e-42
gnl|LJGI|FS325243 similar to UniRef100_A7NSS5 Cluster: Chromosom... 82 2e-14
>gnl|LJGI|TC75236 homologue to UniRef100_A7QDT2 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 762
Score = 1187 bits (599), Expect = 0.0
Identities = 615/618 (99%), Gaps = 3/618 (0%)
Strand = Plus / Plus
Query: 1 atgatgctagacggaaccgaagacgaagagaagttcctcgccgccggaatcgccggcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atgatgctagacggaaccgaagacgaagagaagttcctcgccgccggaatcgccggcctc 206
Query: 61 caacagaattccttctacatgcaccgtgcattggactcgaacaatctcagagatgcgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 caacagaattccttctacatgcaccgtgcattggactcgaacaatctcagagatgcgttg 266
Query: 121 aagtattcggctcagatgctttccgagctcagaacttccaagctctctcctcacaagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagtattcggctcagatgctttccgagctcagaacttccaagctctctcctcacaagtac 326
Query: 181 tacgaactctatatgcgtgcctttgatcaattaaggaagctcgagatgttcttcgaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tacgaactctatatgcgtgcctttgatcaattaaggaagctcgagatgttcttcgaggaa 386
Query: 241 gaggctcgtcgcggttgctccattattgatctttatgaacttgtccagcatgctggaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gaggctcgtcgcggttgctccattattgatctttatgaacttgtccagcatgctggaaac 446
Query: 301 attttgcctcgattgtatctcctctgtacagtaggatctgtatacataaaatccaaggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 attttgcctcgattgtatctcctctgtacagtaggatctgtatacataaaatccaaggaa 506
Query: 361 gctcctgctaaggatgttcttaaggatcttgtagagatgtgtcgtggcattcagcaccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gctcctgctaaggatgttcttaaggatcttgtagagatgtgtcgtggcattcagcaccct 566
Query: 421 gttcgcggactctttctcagaagttacctttctcaagttagtagagataaattgccagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gttcgcggactctttctcagaagttacctttctcaagttagtagagataaattgccagat 626
Query: 481 attggttctgaatatgaaggggatgcagatactgtagcagatgctgtagagtttgtactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 attggttctgaatatgaaggggatgcagatactgtagcagatgctgtagagtttgtactc 686
Query: 541 caaaacttcacagaaatgaacaaactttgggtgcggatgcaacatcaggggcctgcccgg 600
||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 687 caaaacttcacagaaatgaac-aactttgggtgcggatgcaacatca--ggcctgcccgg 743
Query: 601 gagaaggagaaacgggaa 618
||||||||||||||||||
Sbjct: 744 gagaaggagaaacgggaa 761
>gnl|LJGI|FS336009 homologue to UniRef100_A7QDT2 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 609
Score = 952 bits (480), Expect = 0.0
Identities = 501/506 (99%), Gaps = 4/506 (0%)
Strand = Plus / Plus
Query: 586 caggggcctgcccgggagaaggagaaacgggaaaaggaaaggagcgagctgcgcgatctt 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 caggggcctgcccgggagaaggagaaacgggaaaaggaaaggagcgagctgcgcgatctt 167
Query: 646 gttgggaagaatctccatgttctcagtcagatagagggtgttgaccttgagatgtacaaa 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gttgggaagaatctccatgttctcagtcagatagagggtgttgaccttgagatgtacaaa 227
Query: 706 gatgttgtgcttcctagagtgctggagcaggttgtgaattgcaaagatgagttggcccag 765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gatgttgtgcttcctagagtgctggagcaggttgtgaattgcaaagatgagttggcccag 287
Query: 766 ttctacttgatggattgcataatccaagtcttccctgatgagtatcacttgcaaactctt 825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttctacttgatggattgcataatccaagtcttccctgatgagtatcacttgcaaactctt 347
Query: 826 gatgtattgttgggtgcttatcctcagcttcaggcatctgttgacatcaagacagtgtta 885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gatgtattgttgggtgcttatcctcagcttcaggcatctgttgacatcaagacagtgtta 407
Query: 886 tcccagttaatggaaagactttctaattatgctgcttcaagtgctgaggtgttgcctgag 945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tcccagttaatggaaagactttctaattatgctgcttcaagtgctgaggtgttgcctgag 467
Query: 946 tttttgcaagtggaagcattttccaaattaagcagtgccattggcaaggtgatagaggca 1005
||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tttttgcaa--gaaagcattttccaaattaagcagtgccattggcaaggtgatagaggca 525
Query: 1006 catcctgacatgctcacttttggtgttgtaactttatattcatctcttctcactttcact 1065
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 catcctg--atgctcacttttggtgttgtaactttatattcatctcttctcactttcact 583
Query: 1066 cttcatgtccaccctgatcgacttga 1091
||||||||||||||||||||||||||
Sbjct: 584 cttcatgtccaccctgatcgacttga 609
Score = 54.0 bits (27), Expect = 4e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 563 aactttgggtgcggatgcaacatcagg 589
|||||||||||||||||||||||||||
Sbjct: 1 aactttgggtgcggatgcaacatcagg 27
>gnl|LJGI|TC71745 similar to UniRef100_A7QDT2 Cluster: Chromosome chr4 scaffold_83,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_83, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 938
Score = 543 bits (274), Expect = e-153
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1920 tactttaactcacaaggccacagggtattcagcaaagcttttaaagaagccagatcaatg 1979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactttaactcacaaggccacagggtattcagcaaagcttttaaagaagccagatcaatg 64
Query: 1980 cagagccgtgtatgcatgctcacatctgttttgggttgatgatcatgataacatgaaaga 2039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cagagccgtgtatgcatgctcacatctgttttgggttgatgatcatgataacatgaaaga 124
Query: 2040 tggagagagagtcctattgtgtctcaagcgggctttaagaattgcaaatgctgcacaaca 2099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tggagagagagtcctattgtgtctcaagcgggctttaagaattgcaaatgctgcacaaca 184
Query: 2100 aatgacaaatgcagcacgaggtagcaccggatcagtgatgcttttcattgagatattgaa 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aatgacaaatgcagcacgaggtagcaccggatcagtgatgcttttcattgagatattgaa 244
Query: 2160 caagtatctttacttctttgagaaggggaaccca 2193
||||||||||||||||||||||||||||||||||
Sbjct: 245 caagtatctttacttctttgagaaggggaaccca 278
>gnl|LJGI|TC70642 similar to UniRef100_A7NSS5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 1040
Score = 172 bits (87), Expect = 6e-42
Identities = 237/287 (82%)
Strand = Plus / Plus
Query: 1817 tatatgaagaagaaatttcggattccagagcacagatcacagctatccatttaataatag 1876
||||||||||||||||| ||||||| | ||| ||| | || || || || ||||| || |
Sbjct: 147 tatatgaagaagaaattgcggattctaaagctcaggtaactgcaatacacttaattatcg 206
Query: 1877 gaactcttcaaaggatgcatgtatttggtgtggagaacagggatactttaactcacaagg 1936
| ||||| || || ||| | || |||||||| |||||||||||||| ||||| |||||||
Sbjct: 207 ggactctccagagaatgaacgtctttggtgttgagaacagggatacgttaacacacaagg 266
Query: 1937 ccacagggtattcagcaaagcttttaaagaagccagatcaatgcagagccgtgtatgcat 1996
||||||||||||||||||||||||| ||||| || ||||| ||| | || || |||||||
Sbjct: 267 ccacagggtattcagcaaagcttttgaagaaacctgatcagtgccgtgcggtttatgcat 326
Query: 1997 gctcacatctgttttgggttgatgatcatgataacatgaaagatggagagagagtcctat 2056
|||||||||| ||||||||||||||||| ||| || ||||| ||||| ||||| |
Sbjct: 327 gctcacatctcttttgggttgatgatcaagatggtattaaagacggagaaagagtattgc 386
Query: 2057 tgtgtctcaagcgggctttaagaattgcaaatgctgcacaacaaatg 2103
| || || ||||| ||||| || |||||||||||||| || ||||||
Sbjct: 387 tttgccttaagcgtgctttgaggattgcaaatgctgctcagcaaatg 433
>gnl|LJGI|FS325243 similar to UniRef100_A7NSS5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 778
Score = 81.8 bits (41), Expect = 2e-14
Identities = 191/241 (79%)
Strand = Plus / Plus
Query: 260 ccattattgatctttatgaacttgtccagcatgctggaaacattttgcctcgattgtatc 319
||||| ||||||| ||||| ||||| ||||| |||||||| || |||||| || ||||||
Sbjct: 347 ccattgttgatctctatgagcttgttcagcacgctggaaatatattgcctagactgtatc 406
Query: 320 tcctctgtacagtaggatctgtatacataaaatccaaggaagctcctgctaaggatgttc 379
| || ||||| | |||||| || ||| | | || ||||| ||||||| ||||| ||||
Sbjct: 407 ttctttgtacggcaggatccgtttacctcagatgtaaggatgctcctgtaaaggacgttc 466
Query: 380 ttaaggatcttgtagagatgtgtcgtggcattcagcaccctgttcgcggactctttctca 439
|||| ||||| ||||| ||||| || || |||| || || |||| || || || | |
Sbjct: 467 ttaaagatctagtagaaatgtgccgcagcgttcaacatccaattcgtggtctattcttga 526
Query: 440 gaagttacctttctcaagttagtagagataaattgccagatattggttctgaatatgaag 499
| |||||||| |||||| | |||||||| || ||||| ||||| || |||||||||||||
Sbjct: 527 ggagttacctgtctcaaatcagtagagacaagttgcctgatatcggctctgaatatgaag 586
Query: 500 g 500
|
Sbjct: 587 g 587