Miyakogusa Predicted Gene
- Lj2g3v1670940.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1670940.1 tr|G7JXL5|G7JXL5_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_5g0,72.97,0,seg,NULL; PPR,Pentatricopeptide repeat; PGR3
(PROTON GRADIENT REGULATION 3),NULL; FAMILY NOT NAMED,N,CUFF.37646.1
(1846 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AI967878 weakly similar to UniRef100_Q0DLD7 Cluster: Os... 630 e-180
gnl|LJGI|FS333508 weakly similar to UniRef100_A8IYI6 Cluster: Mb... 305 5e-82
>gnl|LJGI|AI967878 weakly similar to UniRef100_Q0DLD7 Cluster: Os05g0107000 protein;
n=1; Oryza sativa Japonica Group|Rep: Os05g0107000
protein - Oryza sativa subsp. japonica (Rice), partial
(6%)
Length = 365
Score = 630 bits (318), Expect = e-180
Identities = 349/358 (97%), Gaps = 1/358 (0%)
Strand = Plus / Plus
Query: 1029 gacaaaccggaatttggtgtcgtggaatgcaatgatcttggggcattgcattcatgggag 1088
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9 gacaaaccggaatttggtgtcctggaatgcaatgatcttggggcattgcattcatgggaa 68
Query: 1089 tcctgaagatggactgagcctgtttgatgaaatggttgggatggacaaggtgaaagggga 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 tcctgaagatggactgagcctgtttgatgaaatggttgggatggacaaggtgaaagggga 128
Query: 1149 agttgagattgatgagagtccatgtgcagatagaggtgtggtaaggttacaacctgatga 1208
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 129 agttgagattgatgagagtccatgtgcagatagaggtgtggtaaggttaccacctgatga 188
Query: 1209 agtaaccttcattgggatactttgtgcctgtgctagggcagagttgttggctgagggcag 1268
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 189 agtaaccttcattgggatactttgtgcctgtgctagggcagaattgttggctgagggcag 248
Query: 1269 gtcttacttcaaacaaatgactgacgtatttggtttgaagcccaattttgctcatttatg 1328
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 249 gtcttacttcaaacaaatgactgacgtatttggtttgaag-ccaattttgctcatttatg 307
Query: 1329 gtgcatggctaatctgcttgcaaatgcagggcttgttgatgaggcagaaaagtgtctg 1386
||||||||| |||||||||||||||||| ||||||||||||| || ||||||||||||
Sbjct: 308 gtgcatggccaatctgcttgcaaatgcacggcttgttgatgaagccgaaaagtgtctg 365
>gnl|LJGI|FS333508 weakly similar to UniRef100_A8IYI6 Cluster: Mbeta non-catalytic
subunit of periplasmic L-amino acid oxidase; n=1;
Chlamydomonas reinhardtii|Rep: Mbeta non-catalytic
subunit of periplasmic L-amino acid oxidase -
Chlamydomonas reinhardtii, partial (4%)
Length = 202
Score = 305 bits (154), Expect = 5e-82
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 115 tctgaaaccgacggaaaaccaccacccttcacccgacaccacttccaaacgcttcttcaa 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 tctgaaaccgacggaaaaccaccacccttcacccgacaccacttccaaacgcttcttcaa 108
Query: 175 tcctcttgccaaacccctcgccacctccttcaaatccaagcccttctcatcaccacaact 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 tcctcttgccaaacccctcgccacctccttcaaatccaagcccttctcatcaccacaact 168
Query: 235 cttgcccgtatacccttcttggcacgaacccttc 268
||||||||||||||||||||||||||||||||||
Sbjct: 169 cttgcccgtatacccttcttggcacgaacccttc 202