Miyakogusa Predicted Gene
- Lj2g3v1647850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1647850.1 tr|A9RQ75|A9RQ75_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_117579,31.68,1e-18,DNase-RNase,Bifunctional nuclease;
seg,NULL; Hypothetical protein TM0160,Bifunctional
nuclease,NODE_62094_length_1332_cov_62.785286.path1.1
(972 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77774 similar to UniRef100_A7R1S1 Cluster: Chromosome... 1029 0.0
gnl|LJGI|TC74160 similar to UniRef100_Q56HE3 Cluster: NADH-ubiqu... 412 e-114
gnl|LJGI|BP050105 similar to UniRef100_UPI000065FCE3 Cluster: Ho... 105 5e-22
>gnl|LJGI|TC77774 similar to UniRef100_A7R1S1 Cluster: Chromosome chr4 scaffold_373,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_373, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 1115
Score = 1029 bits (519), Expect = 0.0
Identities = 522/523 (99%)
Strand = Plus / Plus
Query: 1 atgctctgttctcgatcctgcatccgcacgatcgccgtcaccgccgatcacacgaatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgctctgttctcgatcctgcatccgcacgatcgccgtcaccgccgatcacacgaatgcc 131
Query: 61 gcctccaccacccgctccttccctcactccctcgccgtcgatttctcgtcccatcccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gcctccaccacccgctccttccctcactccctcgccgtcgatttctcgtcccatcccttc 191
Query: 121 cctctcatccgaacccgtcgttttcgctgtcccaaatcaatcctcatttcctgcaactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cctctcatccgaacccgtcgttttcgctgtcccaaatcaatcctcatttcctgcaactcc 251
Query: 181 tcccgcaccagcagatccagtttccccgatcatcacaacaacgacgatttccttgaagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcccgcaccagcagatccagtttccccgatcatcacaacaacgacgatttccttgaagct 311
Query: 241 tccctccttctctcagaaacaatctcgcactatcacatgtggaggcaacgatttcaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tccctccttctctcagaaacaatctcgcactatcacatgtggaggcaacgatttcaacca 371
Query: 301 gagttacaacggaaatcacgtagaccatcgattcccttatctgtacaggaaaaaacttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gagttacaacggaaatcacgtagaccatcgattcccttatctgtacaggaaaaaacttca 431
Query: 361 aggtcatataataatttatcaagacaaggctttctgcagcgtttccagaatcctactatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aggtcatataataatttatcaagacaaggctttctgcagcgtttccagaatcctactatt 491
Query: 421 tttctcaaggtttcttgtgatggagactatattctgcccattgttttagggaagattgct 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 492 tttctcaaggtttcttgtgatggagactatattctgcccattgttgtagggaagattgct 551
Query: 481 attgaaaaacttataggtgctgaagttgaacaagaaagtgagg 523
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 attgaaaaacttataggtgctgaagttgaacaagaaagtgagg 594
Score = 121 bits (61), Expect = 9e-27
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 521 aggattgcccagaccagttccagtttgtgaaagacctggttgatagactagatcatgaag 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 aggattgcccagaccagttccagtttgtgaaagacctggttgatagactagatcatgaag 733
Query: 581 t 581
|
Sbjct: 734 t 734
>gnl|LJGI|TC74160 similar to UniRef100_Q56HE3 Cluster: NADH-ubiquinone oxidoreductase
chain 1; n=1; Homalonychus selenopoides|Rep:
NADH-ubiquinone oxidoreductase chain 1 - Homalonychus
selenopoides, partial (12%)
Length = 552
Score = 412 bits (208), Expect = e-114
Identities = 208/208 (100%)
Strand = Plus / Plus
Query: 765 acttggttatggaatgggaggagtgcttaagaaaaaggctacttatgatgtattgcttga 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttggttatggaatgggaggagtgcttaagaaaaaggctacttatgatgtattgcttga 60
Query: 825 cagtcctctagatggtccagatgtggtagctcaagaactgagtatgatgcgtagtatgca 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cagtcctctagatggtccagatgtggtagctcaagaactgagtatgatgcgtagtatgca 120
Query: 885 tacagccatcaaaatggaaagatttaaagatgcagctatatggagagacaaacttgcaaa 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacagccatcaaaatggaaagatttaaagatgcagctatatggagagacaaacttgcaaa 180
Query: 945 tcttcgtaaatcttctcatgggagctaa 972
||||||||||||||||||||||||||||
Sbjct: 181 tcttcgtaaatcttctcatgggagctaa 208
>gnl|LJGI|BP050105 similar to UniRef100_UPI000065FCE3 Cluster: Homolog of Homo sapiens
'Splice Isoform 2 of Homeodomain-interacting protein
kinase 3; n=1;, partial (1%)
Length = 387
Score = 105 bits (53), Expect = 5e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 912 agatgcagctatatggagagacaaacttgcaaatcttcgtaaatcttctcatgggagcta 971
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 387 agatgcagctatatggagagaccaacttgccaatcttcgtaaatcttctcatgggagcta 328
Query: 972 a 972
|
Sbjct: 327 a 327