Miyakogusa Predicted Gene
- Lj2g3v1644310.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1644310.1 CUFF.37567.1
(1161 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82600 similar to UniRef100_P27450 Cluster: Probable s... 1243 0.0
gnl|LJGI|TC69412 similar to UniRef100_A7QPC2 Cluster: Chromosome... 359 3e-98
gnl|LJGI|TC82264 similar to UniRef100_P27450 Cluster: Probable s... 287 8e-77
gnl|LJGI|TC60178 similar to UniRef100_A7P8Q9 Cluster: Chromosome... 72 9e-12
gnl|LJGI|TC58557 similar to UniRef100_A7NYZ7 Cluster: Chromosome... 70 3e-11
gnl|LJGI|TC66119 similar to UniRef100_A7QPC2 Cluster: Chromosome... 62 8e-09
gnl|LJGI|TC65945 similar to UniRef100_A7QPC2 Cluster: Chromosome... 62 8e-09
gnl|LJGI|TC82296 54 2e-06
gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome... 52 8e-06
>gnl|LJGI|TC82600 similar to UniRef100_P27450 Cluster: Probable
serine/threonine-protein kinase Cx32, chloroplast
precursor; n=1; Arabidopsis thaliana|Rep: Probable
serine/threonine-protein kinase Cx32, chloroplast
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (41%)
Length = 928
Score = 1243 bits (627), Expect = 0.0
Identities = 643/649 (99%)
Strand = Plus / Plus
Query: 59 caggtagaacaagtagtggtagtgggaagagtagcatgagccaagtatgggagataaata 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 caggtagaacaagtagtggtagtgggaagagtagcatgagccaagtatgggagataaata 339
Query: 119 ctgaaagtgaaagtggtagtgttgttaataatgttaagggtggttctggggagtttctgg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 ctgaaagtgaaagtggtagtgttgttaataatgttaagggtggttctggggagtttctgg 399
Query: 179 aagtggcgaagttgaaggtgtttagctttggggatttgaaatcggctacaaagagtttca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aagtggcgaagttgaaggtgtttagctttggggatttgaaatcggctacaaagagtttca 459
Query: 239 aggctgatgcattgattggagaaggtggatttggtaaagtttacaaaggttggttggatg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 460 aggctgatgcattgattggagaaggtggatttggtaaagtttacaaaggttggctggatg 519
Query: 299 agaagaagctgagccctacaaaacctggctctggaattatggttgctgtaaagaaattga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agaagaagctgagccctacaaaacctggctctggaattatggttgctgtaaagaaattga 579
Query: 359 acccagaaagcatgcagggctttcatgaatggcagtcagaaatcaactttttaggaagga 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 acccagaaagcatgcagggctttcatgaatggcagtcagaaatcaactttttaggaagga 639
Query: 419 tttctcatcccaacctagtcaagctattgggttactgtagggatgatgaggaatttctac 478
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 640 tttctcatcccaacctagtcaagctcttgggttactgtagggatgatgaggaatttctac 699
Query: 479 ttgtgtacgaattcatgccaagaggaagcttggaaaatcatctcttcagaagaaatacag 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ttgtgtacgaattcatgccaagaggaagcttggaaaatcatctcttcagaagaaatacag 759
Query: 539 aatcactttcttggaacacccgactcaaaatcgccattggtgcggctcggggcttggcat 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aatcactttcttggaacacccgactcaaaatcgccattggtgcggctcggggcttggcat 819
Query: 599 tcttgcactccttagagaagatagtcatatacagagatttcaaggcctccaatatactac 658
|||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 tcttgcactccttanagaaaatagtcatatacagagatttcaaggcctccaatatactac 879
Query: 659 ttgatgggaattacaatgcaaaaatttcagattttggtttagcaaaatt 707
||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 880 ttgatgggaattacaatgcaaaaatttcanattttggtttaacaaaatt 928
Score = 115 bits (58), Expect = 6e-25
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 1 atgggtctctgcttcagttcaccctcctcctccatcctcagcatgcctcctcagtattca 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 136 atgggtctctgcttcagttcaccttcctcctccatcctcagcatgcctcctcagtattca 195
Query: 61 gg 62
||
Sbjct: 196 gg 197
>gnl|LJGI|TC69412 similar to UniRef100_A7QPC2 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 1248
Score = 359 bits (181), Expect = 3e-98
Identities = 497/602 (82%), Gaps = 9/602 (1%)
Strand = Plus / Plus
Query: 276 agtttacaaaggttggttggatgagaagaagctgagccctacaaaacctggctctggaat 335
||||||||| ||||||||||||||||||| ||| || | ||| | |||||||||||
Sbjct: 7 agtttacaagggttggttggatgagaagacgcttgcaccggccaaagcaggctctggaat 66
Query: 336 tatggttgctgtaaagaaattgaacccagaaagcatgcagggctttcatgaatggcagtc 395
|||||||| | |||||||||||||| ||||||| || || ||||| |||||||||||
Sbjct: 67 ggtggttgctattaagaaattgaaccctgaaagcacacaagggtttcaagaatggcagtc 126
Query: 396 agaaatcaactttttaggaaggatttctcatcccaacctagtcaagctattgggttactg 455
||||||||||||| |||| ||| ||||||| ||||| | || ||| |||||||||||||
Sbjct: 127 agaaatcaactttctagggaggctttctcaccccaatttggttaagttattgggttactg 186
Query: 456 tagggatgatgaggaatttctacttgtgtacgaattcatgccaagaggaagcttggaaaa 515
| |||| ||||| | |||| |||||||| || || ||||||| ||||||||||||||
Sbjct: 187 ttgggaggatgacaaccttcttcttgtgtatgagtttatgccaaagggaagcttggaaaa 246
Query: 516 tcatctcttcagaagaaataca------gaatcactttcttggaacacccgactcaaaat 569
|||||| |||||||||||| || ||| ||||||||||||||||||| | |||||
Sbjct: 247 tcatctattcagaagaaatccaaagatagaactactttcttggaacacccgaattaaaat 306
Query: 570 cgccattggtgcggctcggggcttggcattcttgcactccttagagaagatagtcatata 629
|| |||||||| |||||||||||||| ||||||||| | | || || |||||| ||
Sbjct: 307 agctattggtgccgctcggggcttggctttcttgcacacttctgaaaa---agtcatcta 363
Query: 630 cagagatttcaaggcctccaatatactacttgatgggaattacaatgcaaaaatttcaga 689
||||||||||||||||| |||||||| || |||||| |||||||||||||||| |||||
Sbjct: 364 tagagatttcaaggcctcaaatatactgctcgatggggattacaatgcaaaaatctcaga 423
Query: 690 ttttggtttagcaaaatttggaccatctggggaagagtcacacgtgactaccaggatcat 749
|||||| || || ||||| || || |||||| | | || || || ||||||||| | ||
Sbjct: 424 ttttggcttggctaaattggggccggctgggggacaatcccatgtaactaccagggtaat 483
Query: 750 gggcacatatggctatgctgctccagaatacatggcaacagggcacttgtatgtaaagag 809
|||||| ||||| ||||||||||| |||||||| ||||| |||||||||||||| |||||
Sbjct: 484 gggcacgtatggttatgctgctccggaatacatcgcaactgggcacttgtatgtgaagag 543
Query: 810 tgatgtttatgggtttggtgtagtgctgcttgaaatgctgacagggttgcaagcacttga 869
||||| || ||||| ||||| |||||||||||||| || ||||| ||| |||||| ||
Sbjct: 544 cgatgtgtacgggttcggtgtggtgctgcttgaaattctcacaggcatgcgagcactgga 603
Query: 870 ta 871
||
Sbjct: 604 ta 605
>gnl|LJGI|TC82264 similar to UniRef100_P27450 Cluster: Probable
serine/threonine-protein kinase Cx32, chloroplast
precursor; n=1; Arabidopsis thaliana|Rep: Probable
serine/threonine-protein kinase Cx32, chloroplast
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (5%)
Length = 645
Score = 287 bits (145), Expect = 8e-77
Identities = 145/145 (100%)
Strand = Plus / Plus
Query: 1017 aaaatgccttgaacctgaccctaaaaaccgtccttctatgaaggatgttgtggagacatt 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aaaatgccttgaacctgaccctaaaaaccgtccttctatgaaggatgttgtggagacatt 60
Query: 1077 ggaaggcattaaagcagtaaacaataattataacatatccaataaacactctactaagtc 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaaggcattaaagcagtaaacaataattataacatatccaataaacactctactaagtc 120
Query: 1137 tacagctatgcacattcgatagccg 1161
|||||||||||||||||||||||||
Sbjct: 121 tacagctatgcacattcgatagccg 145
>gnl|LJGI|TC60178 similar to UniRef100_A7P8Q9 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (78%)
Length = 1707
Score = 71.9 bits (36), Expect = 9e-12
Identities = 159/200 (79%)
Strand = Plus / Plus
Query: 628 tacagagatttcaaggcctccaatatactacttgatgggaattacaatgcaaaaatttca 687
||||||||||||||||||||||||||| | ||||||||| || |||||||| || |||
Sbjct: 782 tacagagatttcaaggcctccaatatattgcttgatgggtcctataatgcaaagatatca 841
Query: 688 gattttggtttagcaaaatttggaccatctggggaagagtcacacgtgactaccaggatc 747
|| ||||| || |||||| | || || || | | || || ||||| || ||| |
Sbjct: 842 gactttgggttggcaaaactgggtccttcagctagtaaatcccatgtgacaacaagggtg 901
Query: 748 atgggcacatatggctatgctgctccagaatacatggcaacagggcacttgtatgtaaag 807
|||||||||||||| ||||| ||||| ||||| |||| |||||||| || ||| | |||
Sbjct: 902 atgggcacatatggttatgcggctcctgaatatgtggccacagggcatttatatatgaag 961
Query: 808 agtgatgtttatgggtttgg 827
|||||||| |||| ||||||
Sbjct: 962 agtgatgtgtatgcgtttgg 981
>gnl|LJGI|TC58557 similar to UniRef100_A7NYZ7 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (79%)
Length = 1429
Score = 69.9 bits (35), Expect = 3e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 748 atgggcacatatggctatgctgctccagaatacatggcaacagggcacttg 798
|||||||||||||||||||||||||| ||||| ||||| ||||| ||||||
Sbjct: 840 atgggcacatatggctatgctgctcctgaatatatggccacaggtcacttg 890
>gnl|LJGI|TC66119 similar to UniRef100_A7QPC2 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (46%)
Length = 767
Score = 61.9 bits (31), Expect = 8e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 622 gtcatatacagagatttcaaggcctccaatatactacttgatgggaattacaatgcaaaa 681
||||| ||||||||||||||| ||||||| || |||||||| || ||| |||||||||
Sbjct: 682 gtcatctacagagatttcaagtcctccaacattttacttgatagggatttcaatgcaaag 741
Query: 682 atttcagattttggtttagcaaa 704
|||| |||||||| || |||||
Sbjct: 742 ctttccgattttgggttggcaaa 764
>gnl|LJGI|TC65945 similar to UniRef100_A7QPC2 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (83%)
Length = 1516
Score = 61.9 bits (31), Expect = 8e-09
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 622 gtcatatacagagatttcaaggcctccaatatactacttgatgggaattacaatgcaaaa 681
||||| ||||||||||||||| ||||||| || |||||||| || ||| |||||||||
Sbjct: 624 gtcatctacagagatttcaagtcctccaacattttacttgatagggatttcaatgcaaag 683
Query: 682 atttcagattttggtttagcaaa 704
|||| |||||||| || |||||
Sbjct: 684 ctttccgattttgggttggcaaa 706
>gnl|LJGI|TC82296
Length = 1729
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 250 ttgattggagaaggtggatttggtaaagtttacaa 284
||||||||||||||||| ||||| |||||||||||
Sbjct: 690 ttgattggagaaggtggttttggaaaagtttacaa 724
>gnl|LJGI|TC65506 similar to UniRef100_A7QCN9 Cluster: Chromosome chr12 scaffold_78,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_78, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 1259
Score = 52.0 bits (26), Expect = 8e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 751 ggcacatatggctatgctgctccaga 776
||||||||||||||||||||||||||
Sbjct: 137 ggcacatatggctatgctgctccaga 162