Miyakogusa Predicted Gene

Lj2g3v1601010.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1601010.2 Non Chatacterized Hit- tr|Q8C0U7|Q8C0U7_MOUSE
Putative uncharacterized protein OS=Mus musculus
GN=Ml,30.92,3e-18,MutL_C,MutL, C-terminal, dimerisation; DNA MISMATCH
REPAIR PROTEIN MLH3,NULL; DNA MISMATCH REPAIR PR,CUFF.37557.2
         (2049 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS362323 similar to UniRef100_A7QWM7 Cluster: Chromosom...   825   0.0  

>gnl|LJGI|FS362323 similar to UniRef100_A7QWM7 Cluster: Chromosome chr4 scaffold_205,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr4 scaffold_205, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (9%)
          Length = 640

 Score =  825 bits (416), Expect = 0.0
 Identities = 422/424 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1626 caacagacaccaaatggccttcacgcttattgcggtaccgtgtattttaggtgccaattt 1685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640  caacagacaccaaatggccttcacgcttattgcggtaccgtgtattttaggtgccaattt 581

                                                                        
Query: 1686 aaatgatgttgatcttttagaatatcttcagcagcttgctgacactgatggatcatcaac 1745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580  aaatgatgttgatcttttagaatatcttcagcagcttgctgacactgatggatcatcaac 521

                                                                        
Query: 1746 aatgccaccctccgttatacgagtcctaaattcaaaagcatgccgtggtgcaattatgtt 1805
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520  aatgccaccctccgttatacgagtcctaaattcaaaagcatgccgtggtgcaattatgtt 461

                                                                        
Query: 1806 tggggattcattgctaccgtcagaatgttcccttatagttgaagagttgaggcttacgtc 1865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460  tggggattcattgctaccgtcagaatgttcccttatagttgaagagttgaggcttacgtc 401

                                                                        
Query: 1866 actttgtttccaatgtgctcatgggcgaccaacaactgttcctctggtcaacttggaggc 1925
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 400  actttgtttccaatgtgctcatgggcgaccaacaactgttcctttggtcaacttggaggc 341

                                                                        
Query: 1926 actacataatcagatacccaagcttggacggatgaatgattactcaagtgacaagtggca 1985
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340  actacataatcagatacccaagcttggacggatgaatgattactcaagtgacaagtggca 281

                                                                        
Query: 1986 tggattacaaagatgcgaaataagtttagaacgtgccgcgcgacgtttatcttgtgatta 2045
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 280  tggattacaaagatgcgaaataagtttagaacgtgccgcgcgacgtttattttgtgatta 221

                
Query: 2046 gagg 2049
            ||||
Sbjct: 220  gagg 217