Miyakogusa Predicted Gene
- Lj2g3v1589610.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1589610.2 tr|I1J8B7|I1J8B7_SOYBN Glutamate receptor
OS=Glycine max PE=3 SV=1,79.52,0,no description,NULL; seg,NULL;
Periplasmic binding protein-like II,NULL; Periplasmic binding
protein,CUFF.37543.2
(1677 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79032 similar to UniRef100_A7PKV6 Cluster: Chromosome... 1292 0.0
gnl|LJGI|TC77528 similar to UniRef100_A7PKV6 Cluster: Chromosome... 406 e-112
gnl|LJGI|DC594966 similar to UniRef100_A7PXG9 Cluster: Chromosom... 56 7e-07
>gnl|LJGI|TC79032 similar to UniRef100_A7PKV6 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 905
Score = 1292 bits (652), Expect = 0.0
Identities = 676/684 (98%)
Strand = Plus / Plus
Query: 994 catgagattggtattgatgaatccaggcttgttcctttaaaaacaccagaagaatgtgct 1053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catgagattggtattgatgaatccaggcttgttcctttaaaaacaccagaagaatgtgct 60
Query: 1054 aaagcactcaaaaagggtccccaaaatggtggtgttgttgcttacgtcgatgagcgtgcc 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagcactcaaaaagggtccccaaaatggtggtgttgttgcttacgtcgatgagcgtgcc 120
Query: 1114 tacattgacatcttcctttcaacccggtgtgactttactgttgtaggtcaagaattcacc 1173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacattgacatcttcctttcaacccggtgtgactttactgttgtaggtcaagaattcacc 180
Query: 1174 aggaacggttggggatttgcctttccccgggactcaccactagcgattgacctgtcaact 1233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggaacggttggggatttgcctttccccgggactcaccactagcgattgacctgtcaact 240
Query: 1234 gccattttgcaaatgacagacaatggagatctacagaggatccatgacaaatggcttttg 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccattttgcaaatgacagacaatggagatctacagaggatccatgacaaatggcttttg 300
Query: 1294 agccatgcctgcataacacaaggtgcaaagcttgaagtggaaagactccaacttaaaagc 1353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agccatgcctgcataacacaaggtgcaaagcttgaagtggaaagactccaacttaaaagc 360
Query: 1354 ttttggggcctctatgtaatcagtggttgtgcctgcttgcttgctctattcatatatctt 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttttggggcctctatgtaatcagtggttgtgcctgcttgcttgctctattcatatatctt 420
Query: 1414 atacagatagtgaggcagtacagcaagcactgctcagatgatcatgagttaactgatcaa 1473
|||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| |
Sbjct: 421 atacagatagtgagtcagtaccgcaagccctgctcagatgatcatgagttaactgatcca 480
Query: 1474 agctctggatcaagatcttcacgtctcaggactttcctttcatttatggatgaaaaggaa 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agctctggatcaagatcttcacgtctcaggactttcctttcatttatggatgaaaaggaa 540
Query: 1534 gaaactgtgaagaacaggtccaagagaaggagaatggagaggatctcaaacagaagcagt 1593
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 gaaactgtgaagaacaggtcccagagaaggagaatggagaggatctcgaacagaagcagt 600
Query: 1594 gtgggaggatcaacatccataaactccaatagagactattgtcaagcatctccatataaa 1653
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 601 gtgggaggatcaacatccatagactcccatagagactattgtcaagcatctccatataaa 660
Query: 1654 agtgattatggtaatgaagtctga 1677
||||||||||||||||||||||||
Sbjct: 661 agtgattatggtaatgaagtctga 684
>gnl|LJGI|TC77528 similar to UniRef100_A7PKV6 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 920
Score = 406 bits (205), Expect = e-112
Identities = 671/825 (81%), Gaps = 1/825 (0%)
Strand = Plus / Plus
Query: 590 cagaaaccagtgctttggcctttttggccccatttacaccaaaaatgtggtttgtcacag 649
||||| ||| ||||| ||| |||||| | ||||||||||||| |||||| ||||||||
Sbjct: 28 cagaatccaatgcttgggcatttttgacgccatttacaccaatgatgtggactgtcacag 87
Query: 650 ctagctttttcatattagtgggaattgttgtttggattttggagcatagggtgaacgatg 709
||| ||||||| || |||||||| ||||||||||||||| || |||||| |||| ||||
Sbjct: 88 ctatctttttcctactagtgggagctgttgtttggattttagaacataggctgaatgatg 147
Query: 710 agtttaggggaccaccgaaaagg-caattagtcactatattatggtttagtttttcaact 768
||||||||||||| || |||| ||| | ||||| || || |||||||| |||||||||
Sbjct: 148 agtttaggggacctcccaaaaaaacaaattgtcaccattttgtggtttagcttttcaact 207
Query: 769 atgttctattcccacagggaaaatacagtgagcacacttggccgcattgtgctgcttatt 828
||||||| | | ||||||||||||||||| ||||| ||||| ||| |||||||||||||
Sbjct: 208 atgttctttgctcacagggaaaatacagttagcactcttggtcgctttgtgctgcttata 267
Query: 829 tggttatttgtagtccttataattaactcaagttatacagcaagcttaacatcaatcctc 888
||| |||||||||| || ||||||||||||||||| || |||||| | || |||||||||
Sbjct: 268 tggctatttgtagttctaataattaactcaagttacacggcaagcctgacttcaatcctc 327
Query: 889 acagtgcagcagctttattcgccgattaaaggcattgaaactttagtaaatagcaaggat 948
|| || || || |||| ||| || ||||||||||||||| |||| ||| |||||| ||
Sbjct: 328 actgtacaacaactttcttcacctgttaaaggcattgaaagtttaataagtagcaaagaa 387
Query: 949 cctattggttacaagcagggttcatttgctaaaaattatttgattcatgagattggtatt 1008
| ||| || ||| ||||||||| ||| || || |||||| ||| | || || ||||||
Sbjct: 388 cgtataggctacttgcagggttcttttactcgaacttatttaattgaggaaatgggtatt 447
Query: 1009 gatgaatccaggcttgttcctttaaaaacaccagaagaatgtgctaaagcactcaaaaag 1068
||||||||||| || |||||| ||||| || |||||| | | || ||||| ||||
Sbjct: 448 gatgaatccagactagttcctctaaaagaccctgaagaaactaccaaggcactggaaaaa 507
Query: 1069 ggtccccaaaatggtggtgttgttgcttacgtcgatgagcgtgcctacattgacatcttc 1128
||||| || || |||||| ||| ||| || |||||||||||||| ||||| || | |||
Sbjct: 508 ggtccacataagggtggtattgctgcatatgtcgatgagcgtgcttacatagagcttttc 567
Query: 1129 ctttcaacccggtgtgactttactgttgtaggtcaagaattcaccaggaacggttgggga 1188
||||| || ||||| || |||| |||| |||| || || |||||||| || |||||||||
Sbjct: 568 ctttcgactcggtgcgattttagtgttataggccaggagttcaccagaaatggttgggga 627
Query: 1189 tttgcctttccccgggactcaccactagcgattgacctgtcaactgccattttgcaaatg 1248
||||||||||| || ||||||||| |||| ||||| |||||||||| ||| || || ||
Sbjct: 628 tttgcctttccacgagactcaccattagcacttgacatgtcaactgcaattctggaattg 687
Query: 1249 acagacaatggagatctacagaggatccatgacaaatggcttttgagccatgcctgcata 1308
|||| ||||||||| | || ||||||||||| ||||||||| || | || ||| ||
Sbjct: 688 gcagaaaatggagatttgcaaaggatccatgataaatggcttctgcggagagcttgccta 747
Query: 1309 acacaaggtgcaaagcttgaagtggaaagactccaacttaaaagcttttggggcctctat 1368
||||||||||||||||||||||||| || ||| | || | ||||||||||||||||||
Sbjct: 748 tcacaaggtgcaaagcttgaagtggataggctcaatctcagaagcttttggggcctctac 807
Query: 1369 gtaatcagtggttgtgcctgcttgcttgctctattcatatatctt 1413
|| || |||| | || || || ||||||||| |||||||||||
Sbjct: 808 ttagtctgtgggttggcatgtttacttgctctactcatatatctt 852
>gnl|LJGI|DC594966 similar to UniRef100_A7PXG9 Cluster: Chromosome chr12 scaffold_36,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_36, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 271
Score = 56.0 bits (28), Expect = 7e-07
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 856 tcaagttatacagcaagcttaacatcaatcctcacagtgcagca 899
||||| || ||||||||||||||||| || ||||||||||||||
Sbjct: 5 tcaagctacacagcaagcttaacatccatactcacagtgcagca 48