Miyakogusa Predicted Gene

Lj2g3v1588550.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1588550.1 tr|G3LLC0|G3LLC0_9BRAS AT2G17440-like protein
(Fragment) OS=Capsella rubella PE=4 SV=1,34.42,2e-18,OS11G0675200
PROTEIN,NULL; LEUCINE-RICH REPEAT-CONTAINING PROTEIN,NULL; L
domain-like,NULL; Leucine-,CUFF.37534.1
         (1338 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AU251926 similar to UniRef100_A7PKU2 Cluster: Chromosom...   664   0.0  
gnl|LJGI|TC69742 similar to UniRef100_A7PKU2 Cluster: Chromosome...   375   e-103
gnl|LJGI|AU252159 similar to UniRef100_A7PKU2 Cluster: Chromosom...   266   3e-70

>gnl|LJGI|AU251926 similar to UniRef100_A7PKU2 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 335

 Score =  664 bits (335), Expect = 0.0
 Identities = 335/335 (100%)
 Strand = Plus / Plus

                                                                       
Query: 285 tgataagttaagtttgattaaacttgctagcttaattgaagtttctgcgaagaaaggcac 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgataagttaagtttgattaaacttgctagcttaattgaagtttctgcgaagaaaggcac 60

                                                                       
Query: 345 tcgtgatctgaaactacagaacaagctattggatcaagttgattggctacctgattcatt 404
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcgtgatctgaaactacagaacaagctattggatcaagttgattggctacctgattcatt 120

                                                                       
Query: 405 aggaaagttatcaagcttggtcacccttgatttatcagagaatcggattgtggccttacc 464
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggaaagttatcaagcttggtcacccttgatttatcagagaatcggattgtggccttacc 180

                                                                       
Query: 465 ttccacaattggaggcctttcatcattgaccagattggatttgcataccaataggatcca 524
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccacaattggaggcctttcatcattgaccagattggatttgcataccaataggatcca 240

                                                                       
Query: 525 ggagctccctgattctattggaaatcttctcaatctagtctatctagatctgcggggaaa 584
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggagctccctgattctattggaaatcttctcaatctagtctatctagatctgcggggaaa 300

                                              
Query: 585 ccagttaccatctctgcctgcatcttttggcagat 619
           |||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagttaccatctctgcctgcatcttttggcagat 335


>gnl|LJGI|TC69742 similar to UniRef100_A7PKU2 Cluster: Chromosome chr7 scaffold_20,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_20, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (5%)
          Length = 592

 Score =  375 bits (189), Expect = e-103
 Identities = 189/189 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1150 gaagttccaccaagagatatagctgagaagggagcacaggctgttgttcagtacatggtt 1209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    gaagttccaccaagagatatagctgagaagggagcacaggctgttgttcagtacatggtt 60

                                                                        
Query: 1210 gagcttggggagaagaaggatgttaaaccacaaaagccactaaagcagaaaaagagttgg 1269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   gagcttggggagaagaaggatgttaaaccacaaaagccactaaagcagaaaaagagttgg 120

                                                                        
Query: 1270 gctcagatatgcttcttttcaaagtctaacaaaagaaagcgcggcgttgactatgtgaaa 1329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  gctcagatatgcttcttttcaaagtctaacaaaagaaagcgcggcgttgactatgtgaaa 180

                     
Query: 1330 acctgattt 1338
            |||||||||
Sbjct: 181  acctgattt 189


>gnl|LJGI|AU252159 similar to UniRef100_A7PKU2 Cluster: Chromosome chr7 scaffold_20,
           whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_20, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (4%)
          Length = 169

 Score =  266 bits (134), Expect = 3e-70
 Identities = 159/169 (94%)
 Strand = Plus / Plus

                                                                       
Query: 119 ggaaaccttccaagagttcagagttggttactagagatgatagttatgtgagtaagtcca 178
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ggaaaccttccaagagttcagagttggttactagagatgatagttatgtgagtaagtcca 60

                                                                       
Query: 179 agtccacattctactccaacgggtatggaattgaacccagcatccccaccaaagctcaga 238
           |||||||||||||||||||||||||||||||||||||||||||||||  | || |||| |
Sbjct: 61  agtccacattctactccaacgggtatggaattgaacccagcatccccnncnaacctcaca 120

                                                            
Query: 239 tattggattcatcattcaaacccacaactacctcaggtaaagatggtga 287
           || ||||||||||||||  |||||||||||||||||||||| | |||||
Sbjct: 121 tantggattcatcattcccacccacaactacctcaggtaaacanggtga 169