Miyakogusa Predicted Gene

Lj2g3v1575320.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1575320.1 tr|G7I8V5|G7I8V5_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_1g0,79.67,0,Homing endonucleases,NULL; seg,NULL;
PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-,CUFF.37610.1
         (1833 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338300 similar to UniRef100_A7P9F7 Cluster: Chromosom...   127   3e-28

>gnl|LJGI|FS338300 similar to UniRef100_A7P9F7 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 520

 Score =  127 bits (64), Expect = 3e-28
 Identities = 64/64 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgcaacgaagttggtatcaatttgattttgctcttgccactacgctcgcagattac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 atgatgcaacgaagttggtatcaatttgattttgctcttgccactacgctcgcagattac 516

               
Query: 61  atgg 64
           ||||
Sbjct: 517 atgg 520