Miyakogusa Predicted Gene

Lj2g3v1575300.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1575300.1 Non Chatacterized Hit- tr|D8SPD8|D8SPD8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,45.76,4e-19,UNCHARACTERIZED,NULL; no description,Armadillo-like
helical,CUFF.37608.1
         (372 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60979 similar to UniRef100_A7P9E5 Cluster: Chromosome...   611   e-174

>gnl|LJGI|TC60979 similar to UniRef100_A7P9E5 Cluster: Chromosome chr3 scaffold_8,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr3 scaffold_8, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (39%)
          Length = 713

 Score =  611 bits (308), Expect = e-174
 Identities = 308/308 (100%)
 Strand = Plus / Plus

                                                                       
Query: 65  aggttatgtctatcatttctgtgctttcattaagatccccagaaaatgcagctcgtgcca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aggttatgtctatcatttctgtgctttcattaagatccccagaaaatgcagctcgtgcca 309

                                                                       
Query: 125 ttgaagctggtgctggtgaccttgctattcaagccatggagaaatttcctgcagcacacc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ttgaagctggtgctggtgaccttgctattcaagccatggagaaatttcctgcagcacacc 369

                                                                       
Query: 185 aaatgcaaagaagctcctgtcttatgatcagaaacctagtagtcagaaatccagagaaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aaatgcaaagaagctcctgtcttatgatcagaaacctagtagtcagaaatccagagaaca 429

                                                                       
Query: 245 gaactatattgcttaaaaatggaattgagaaatacataaggaaggcaaagcaaacacatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gaactatattgcttaaaaatggaattgagaaatacataaggaaggcaaagcaaacacatg 489

                                                                       
Query: 305 gaaactgtaaggatgctgctacagatgcactgagggatttggggcttgataattacaact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gaaactgtaaggatgctgctacagatgcactgagggatttggggcttgataattacaact 549

                   
Query: 365 tgtagctg 372
           ||||||||
Sbjct: 550 tgtagctg 557