Miyakogusa Predicted Gene

Lj2g3v1574130.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1574130.1 Non Chatacterized Hit- tr|K4DH47|K4DH47_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,55.06,5e-17,HSP20,Alpha crystallin/Hsp20 domain;
ARID,ARID/BRIGHT DNA-binding domain; ARID/BRIGHT DNA binding
do,CUFF.37532.1
         (2343 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66907 similar to UniRef100_A7QPH7 Cluster: Chromosome...    84   5e-15

>gnl|LJGI|TC66907 similar to UniRef100_A7QPH7 Cluster: Chromosome chr18 scaffold_137,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_137, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (33%)
          Length = 1201

 Score = 83.8 bits (42), Expect = 5e-15
 Identities = 201/254 (79%)
 Strand = Plus / Plus

                                                                        
Query: 1519 tttatgaaagagctcgagaacttctttagggagcggagcatggaattcaaaccgcccaag 1578
            |||||||||||||||||||| ||||  || ||  ||  | ||||||| || || || |||
Sbjct: 719  tttatgaaagagctcgagaatttctacagagaaaggtccttggaatttaagcctcctaag 778

                                                                        
Query: 1579 ttttatggagaaggacttaattgccttaagttatggagatctgtaacgagattgggtggc 1638
            |||||||||||   ||| |||||||| |||||||||||| |||| |  ||| | ||||||
Sbjct: 779  ttttatggagagccactaaattgcctgaagttatggagagctgttatcagacttggtggc 838

                                                                        
Query: 1639 tatgataaggtaacctcatgtaagttatggaggcaagtgggagagtctttcaaacctcca 1698
            ||||||  ||||||   ||  ||||| ||| | ||||| |||||||||||| | || |||
Sbjct: 839  tatgatgtggtaactggatccaagttgtggcgccaagtaggagagtctttccacccccca 898

                                                                        
Query: 1699 aagacatgcactacagtttcatggacttttcggggattttatgagaaggcccttcttgat 1758
            ||||| ||||| ||||| |||||||| ||| |    || ||||||||||| ||| | || 
Sbjct: 899  aagacttgcacaacagtctcatggacatttagaatcttctatgagaaggcacttttggag 958

                          
Query: 1759 tatgaaaggcataa 1772
            ||||||| ||||||
Sbjct: 959  tatgaaaagcataa 972