Miyakogusa Predicted Gene
- Lj2g3v1573100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1573100.1 tr|G7K2M9|G7K2M9_MEDTR Auxin efflux carrier
protein OS=Medicago truncatula GN=MTR_5g024970 PE=4
SV=1,79.85,0,Mem_trans,Auxin efflux carrier; seg,NULL; FAMILY NOT
NAMED,NULL,CUFF.37517.1
(1254 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO032950 weakly similar to UniRef100_A7QSR6 Cluster: Ch... 383 e-105
gnl|LJGI|TC80242 weakly similar to UniRef100_A7QSR7 Cluster: Chr... 270 2e-71
>gnl|LJGI|GO032950 weakly similar to UniRef100_A7QSR6 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (16%)
Length = 229
Score = 383 bits (193), Expect = e-105
Identities = 196/197 (99%)
Strand = Plus / Plus
Query: 1 atggggtttctggatctttttatggttgcctctttcccagtgatcaaaatattgataatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atggggtttctggatctttttatggttgcctctttcccagtgatcaaaatattgataatc 92
Query: 61 actgcaattgggttgtgtcttgcactggataacatcaatttacttggaaaagatgcaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 93 actgcaattgggttgtgtcttgcactggataacatcaatttacttggaaaacatgcaagg 152
Query: 121 atacaagtgaatcatcttgtacattatgtgtttaatcctgcactggtgggtggcaatttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atacaagtgaatcatcttgtacattatgtgtttaatcctgcactggtgggtggcaatttg 212
Query: 181 gctgaaacaattacttc 197
|||||||||||||||||
Sbjct: 213 gctgaaacaattacttc 229
>gnl|LJGI|TC80242 weakly similar to UniRef100_A7QSR7 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (39%)
Length = 610
Score = 270 bits (136), Expect = 2e-71
Identities = 349/420 (83%)
Strand = Plus / Plus
Query: 828 taatttcatgattggctccaatgctccacttcatgtgcttgaagactctgctaccatgct 887
||||||| || ||||| |||||||||||||| |||| ||||||||||||| ||||| |
Sbjct: 76 taatttcctggttggcaacaatgctccacttcgtgtggttgaagactctgcatccatgtt 135
Query: 888 gggtgatgcagccatcccaactataacccttatattaggtgccaacctcctaaaaggctt 947
|||||||||||||| ||||| | || |||||||| ||||| || ||||| ||| ||
Sbjct: 136 aggtgatgcagccattccaacagtcacacttatattgggtgcaaatctccttggaggttt 195
Query: 948 gaagggagcaagtactccattttggacaattataggaattatagcaatcagatacatttt 1007
||||||| ||||||||||| ||||||| ||| | ||||||||| | ||||||| |||||
Sbjct: 196 gaagggaacaagtactccactttggaccattgttggaattatattagtcagatatatttt 255
Query: 1008 gcttccaattgttggtgttctaattgttaaaggggcaacaagcttgggtttggtgcaacc 1067
|| ||| | | |||||| ||||||| ||||||||| || || || ||||||| | |
Sbjct: 256 cctgccactattgggtgttgtaattgtaaaaggggcagtaaaatttggcttggtgccatc 315
Query: 1068 agatcccttataccagtttatgcttcttcttcaatatgcacttcctccagctatgaatat 1127
|||||||||||| |||||| ||||||| |||||||||||| | |||||||||||||||||
Sbjct: 316 agatcccttatatcagtttgtgcttctacttcaatatgcattgcctccagctatgaatat 375
Query: 1128 aggcaccatagcccagttgtttggagctggtgaaagtgaatgttctattatcatgctatg 1187
||| || || || || ||||||||| |||| ||||||||| || |||||||||||||
Sbjct: 376 aggaactatggctcaattgtttggaactggccaaagtgaattctcggttatcatgctatg 435
Query: 1188 gacatatgctttggcatcaattgcagttactctttggtcaacttatttcatgtggctagt 1247
| |||||||| |||| ||||||||||| || |||||||| || |||||||||||||||||
Sbjct: 436 gtcatatgctctggcgtcaattgcagtaaccctttggtccacctatttcatgtggctagt 495