Miyakogusa Predicted Gene
- Lj2g3v1573090.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1573090.2 Non Chatacterized Hit- tr|I1LIE2|I1LIE2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,84.99,0,seg,NULL;
FAR1,FAR1 DNA binding domain; MULE,MULE transposase domain; SWIM,Zinc
finger, SWIM-type; Z,CUFF.37504.2
(2358 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76472 weakly similar to UniRef100_A7QSQ9 Cluster: Chr... 333 3e-90
gnl|LJGI|TC80089 similar to UniRef100_A7QSQ9 Cluster: Chromosome... 278 2e-73
gnl|LJGI|AV779193 165 2e-39
gnl|LJGI|FS338047 similar to UniRef100_A7P8U1 Cluster: Chromosom... 70 7e-11
gnl|LJGI|TC61518 similar to UniRef100_A7P8U1 Cluster: Chromosome... 70 7e-11
gnl|LJGI|CB827002 homologue to UniRef100_A7P8U0 Cluster: Chromos... 54 4e-06
>gnl|LJGI|TC76472 weakly similar to UniRef100_A7QSQ9 Cluster: Chromosome chr4
scaffold_162, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_162, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 469
Score = 333 bits (168), Expect = 3e-90
Identities = 234/256 (91%)
Strand = Plus / Plus
Query: 2103 ggttattttggatggagcttgtaaagaagaccttcgtcagggaaacgaagcaataacaag 2162
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 1 ggttattttggatggagcttgtaaagaagaccttcgtcagggaaacgaagccataaccag 60
Query: 2163 ttgtagtaatgctcaattaagttcacaaatatcttcgtctacggatgaccatgacagaac 2222
|||||||||||||| ||||||||||| ||||||||||| ||||||||||| |||| | ||
Sbjct: 61 ttgtagtaatgctccattaagttcaccaatatcttcgtttacggatgaccctgaccggac 120
Query: 2223 aattggaaagctgacacatcaacttgaccgagcaaggaagaagtgtgaagtttataggtc 2282
||||| ||||||||||||| ||||| |||||| ||| ||||||||||||||||||||||
Sbjct: 121 cattgggaagctgacacatccacttggccgagccagggagaagtgtgaagtttataggtc 180
Query: 2283 caacttgctgtcaattttaaaagccattgacgagcagaagctagaattatcagttaaagt 2342
| |||||||||| |||||||||||| ||||||||| |||||||| |||||| ||||||||
Sbjct: 181 ccacttgctgtccattttaaaagcccttgacgagccgaagctaggattatccgttaaagt 240
Query: 2343 tcaaaatatcaagtta 2358
|| ||||||| |||||
Sbjct: 241 tccaaatatccagtta 256
>gnl|LJGI|TC80089 similar to UniRef100_A7QSQ9 Cluster: Chromosome chr4 scaffold_162,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_162, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 513
Score = 278 bits (140), Expect = 2e-73
Identities = 154/156 (98%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 2205 ggatgaccatgacagaacaattggaaagctgacacatcaacttgaccgagcaaggaagaa 2264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggatgaccatgacagaacaattggaaagctgacacatcaacttgaccgagcaaggaagaa 184
Query: 2265 gtgtgaagtttat-aggtccaacttgctgtcaattttaaaagccattgacgagcagaagc 2323
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 gtgtgaagtttataaggtccaacttgctgtcaattttaaaagccattgacgagcagaagc 244
Query: 2324 tagaattatcagttaaagttc-aaaatatcaagtta 2358
||||||||||||||||||||| ||||||||||||||
Sbjct: 245 tagaattatcagttaaagttcaaaaatatcaagtta 280
>gnl|LJGI|AV779193
Length = 623
Score = 165 bits (83), Expect = 2e-39
Identities = 103/107 (96%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 2004 taagggagtaagctctccaaaagtttatgatgtggctatgagtgctcttcgggaggcagc 2063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 taagggagtaagctctccaaaagtttatgatgtggctatgagtgctcttcgggaggcagc 564
Query: 2064 aaataaagtggaagctgcgt-caaaaaatggtggaaga-ctggttat 2108
|||||||||||||||||||| ||| | ||||||||||| ||||||||
Sbjct: 563 aaataaagtggaagctgcgtccaacatatggtggaagagctggttat 517
>gnl|LJGI|FS338047 similar to UniRef100_A7P8U1 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 734
Score = 69.9 bits (35), Expect = 7e-11
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 898 tttgacacaacatataggtcgaaccgctatagattgccttttgcacctttcactggagta 957
||||||||||| |||||| | |||| ||| || | || ||||| |||||||||| ||
Sbjct: 503 tttgacacaacctataggactaaccagtatcgagttccatttgcctctttcactggggtt 562
Query: 958 aatcatcatggacagcctgtgttatttggttgtgc 992
||||||||||| || ||||||||||||||||||||
Sbjct: 563 aatcatcatgggcaacctgtgttatttggttgtgc 597
>gnl|LJGI|TC61518 similar to UniRef100_A7P8U1 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 790
Score = 69.9 bits (35), Expect = 7e-11
Identities = 80/95 (84%)
Strand = Plus / Plus
Query: 898 tttgacacaacatataggtcgaaccgctatagattgccttttgcacctttcactggagta 957
||||||||||| |||||| | |||| ||| || | || ||||| |||||||||| ||
Sbjct: 460 tttgacacaacctataggactaaccagtatcgagttccatttgcctctttcactggggtt 519
Query: 958 aatcatcatggacagcctgtgttatttggttgtgc 992
||||||||||| || ||||||||||||||||||||
Sbjct: 520 aatcatcatgggcaacctgtgttatttggttgtgc 554
>gnl|LJGI|CB827002 homologue to UniRef100_A7P8U0 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (21%)
Length = 534
Score = 54.0 bits (27), Expect = 4e-06
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 1508 atgagaaagaagtcaaagctgattatgacacaataaacactgctccactactgaagaccc 1567
||||||||||||| | ||| |||||||||||||| || ||| || || ||| |||||
Sbjct: 224 atgagaaagaagtgagagcagattatgacacaatgaatactttgccggtattgaggaccc 283
Query: 1568 catctcccatggagaaacaggca 1590
||||||| |||||||| ||||||
Sbjct: 284 catctccaatggagaagcaggca 306